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Human excitatory amino acid transporter 3 (EAAT3) with bound L-Cysteine in an intermediate outward facing state (slight upper position)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 8CV3
Sample EAAT3 monomer with L-Cys bound at iOFS
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 60670 Reported Resolution (Å) 2.99 Resolution Method FSC 0.143 CUT-OFF Other Details This is number of monomer from C3 expanded particles. Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (8CV3) Refinement Space Refinement Protocol OTHER Refinement Target Overall B Value 59.17 Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 58.25
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI/PHILIPS CM300FEG/T Minimum Defocus (nm) 800 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION CTF CORRECTION CTFFIND MODEL FITTING Coot MODEL REFINEMENT PHENIX INITIAL EULER ASSIGNMENT cryoSPARC 3 FINAL EULER ASSIGNMENT cryoSPARC 3 CLASSIFICATION RELION 3 RECONSTRUCTION cryoSPARC 3
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 4180263 This is the number of trimer particle from the image