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Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-bound partially activated state (lower strand)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 7KO5 experimental model PDB 7UTI experimental model PDB 8V0K in silico model AlphaFold AF-P50752-F1-v4
Sample Native murine cardiac thin filament at pCa=5.8
Specimen Preparation Sample Aggregation State FILAMENT Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 58362 Reported Resolution (Å) 5.3 Resolution Method FSC 0.143 CUT-OFF Other Details filtered to 7 Angstroms Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (7KO5, 7UTI, 8V0K) Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 34
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 3500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION IMAGE ACQUISITION EPU CTF CORRECTION RELION MODEL FITTING PHENIX INITIAL EULER ASSIGNMENT RELION FINAL EULER ASSIGNMENT RELION CLASSIFICATION RELION RECONSTRUCTION RELION MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 7120025