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Core Mediator of PIC-Med-SWI/SNF
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 8CEN
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 6.08 f_angle_d 1.008 f_chiral_restr 0.059 f_plane_restr 0.008 f_bond_d 0.005
Sample Core Mediator of PIC-Med-SWI/SNF
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 1482227 Reported Resolution (Å) 3.4 Resolution Method FSC 0.143 CUT-OFF Other Details cryoPSARC's Local refinement Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (8cen) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 40.8
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 64000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 5 MODEL REFINEMENT PHENIX 1.20.1_4487 RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE