PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 1DJU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1DJU_PLP_B_400Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1DJU_PLP_B_400Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1DJU_PLP_B_400Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1DJU_PLP_B_400 87% 9% 0.099 0.971.82 2.66 3 1010100%1
1DJU_PLP_A_400 70% 5% 0.142 0.9611.98 3.25 4 1100100%1
1GD9_PLP_A_413 74% 13% 0.124 0.9551.64 2.28 3 540100%1
1GDE_PLP_A_413 43% 10% 0.178 0.9112.58 1.74 5 70094%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
2BIE_PLP_B_1361 100% 28% 0.039 0.9891.48 1.39 4 310100%1
4NOG_PLP_A_501 100% 38% 0.042 0.9921.24 1.18 3 100100%1
3WQC_PLP_B_402 100% 21% 0.045 0.9931.96 1.38 4 400100%1
4HT3_PLP_B_401 100% 15% 0.045 0.9932.04 1.72 3 500100%1