PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1GC3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1GC3_PLP_G_3413 | 73% | 2% | 0.133 | 0.972 | 3.61 | 3.31 | 7 | 11 | 2 | 0 | 94% | 0.9375 |
1GC3_PLP_F_2913 | 72% | 6% | 0.136 | 0.972 | 3.43 | 1.58 | 5 | 5 | 0 | 0 | 94% | 0.9375 |
1GC3_PLP_D_1913 | 66% | 1% | 0.15 | 0.966 | 3.53 | 3.67 | 7 | 6 | 2 | 0 | 94% | 0.9375 |
1GC3_PLP_B_913 | 63% | 2% | 0.174 | 0.981 | 4.46 | 2.48 | 7 | 8 | 3 | 0 | 94% | 0.9375 |
1GC3_PLP_H_3913 | 56% | 4% | 0.171 | 0.956 | 4.23 | 1.61 | 8 | 4 | 2 | 0 | 94% | 0.9375 |
1GC3_PLP_C_1413 | 53% | 1% | 0.173 | 0.945 | 2.08 | 6.04 | 7 | 11 | 4 | 0 | 94% | 0.9375 |
1GC3_PLP_E_2413 | 51% | 1% | 0.17 | 0.936 | 1.81 | 5.67 | 5 | 9 | 2 | 0 | 94% | 0.9375 |
1GC3_PLP_A_413 | 45% | 8% | 0.198 | 0.942 | 2.36 | 2.33 | 4 | 5 | 2 | 0 | 94% | 0.9375 |
1GCK_PLP_B_913 | 80% | 21% | 0.111 | 0.972 | 1.52 | 1.77 | 3 | 6 | 0 | 0 | 94% | 0.9375 |
1GC4_PLP_D_1913 | 71% | 8% | 0.137 | 0.968 | 2.72 | 1.95 | 4 | 6 | 1 | 0 | 94% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |