UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 1O25 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1O25_UMP_A_603 | 82% | 9% | 0.115 | 0.969 | 2.1 | 2.34 | 8 | 8 | 4 | 0 | 100% | 1 |
| 1O25_UMP_C_613 | 79% | 9% | 0.119 | 0.965 | 2.12 | 2.4 | 8 | 8 | 2 | 0 | 100% | 1 |
| 1O25_UMP_B_608 | 73% | 11% | 0.128 | 0.956 | 1.95 | 2.28 | 6 | 6 | 1 | 0 | 100% | 1 |
| 1O25_UMP_D_618 | 42% | 8% | 0.188 | 0.906 | 2.07 | 2.58 | 7 | 8 | 1 | 0 | 100% | 1 |
| 3G4A_UMP_B_308 | 98% | 23% | 0.056 | 0.979 | 1.85 | 1.36 | 6 | 6 | 1 | 0 | 100% | 1 |
| 4GTB_UMP_A_302 | 97% | 44% | 0.06 | 0.976 | 0.91 | 1.26 | - | 5 | 0 | 0 | 100% | 1 |
| 4GTF_UMP_A_302 | 97% | 45% | 0.069 | 0.984 | 0.95 | 1.18 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5IOS_UMP_A_302 | 97% | 35% | 0.072 | 0.986 | 1.2 | 1.37 | 3 | 7 | 1 | 0 | 100% | 1 |
| 5IOT_UMP_A_302 | 92% | 25% | 0.087 | 0.979 | 1.38 | 1.64 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
| 3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |
