PID: PERIDININ
PID is a Ligand Of Interest in 1PPR designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1PPR_PID_M_621 | 98% | 12% | 0.047 | 0.975 | 1.9 | 2.11 | 12 | 15 | 1 | 0 | 100% | 1 |
| 1PPR_PID_N_621 | 97% | 11% | 0.049 | 0.971 | 1.87 | 2.15 | 10 | 16 | 1 | 0 | 100% | 1 |
| 1PPR_PID_O_621 | 97% | 14% | 0.05 | 0.972 | 1.86 | 1.93 | 8 | 16 | 3 | 0 | 100% | 1 |
| 1PPR_PID_M_624 | 96% | 13% | 0.054 | 0.968 | 1.85 | 2.03 | 8 | 15 | 0 | 0 | 100% | 1 |
| 1PPR_PID_M_623 | 95% | 10% | 0.056 | 0.97 | 1.91 | 2.23 | 10 | 17 | 1 | 0 | 100% | 1 |
| 1PPR_PID_O_622 | 95% | 11% | 0.054 | 0.967 | 1.85 | 2.19 | 12 | 15 | 1 | 0 | 100% | 1 |
| 1PPR_PID_O_623 | 95% | 13% | 0.056 | 0.969 | 1.73 | 2.09 | 8 | 17 | 0 | 0 | 100% | 1 |
| 1PPR_PID_M_622 | 94% | 11% | 0.056 | 0.963 | 1.83 | 2.21 | 13 | 16 | 1 | 0 | 100% | 1 |
| 1PPR_PID_O_624 | 94% | 13% | 0.058 | 0.965 | 1.81 | 2.08 | 12 | 16 | 0 | 0 | 100% | 1 |
| 1PPR_PID_N_624 | 94% | 10% | 0.059 | 0.964 | 1.99 | 2.22 | 12 | 18 | 2 | 0 | 100% | 1 |
| 1PPR_PID_N_622 | 94% | 10% | 0.059 | 0.964 | 1.95 | 2.23 | 13 | 14 | 1 | 0 | 100% | 1 |
| 1PPR_PID_O_614 | 93% | 9% | 0.063 | 0.964 | 1.91 | 2.36 | 11 | 18 | 2 | 0 | 100% | 1 |
| 1PPR_PID_O_611 | 90% | 13% | 0.068 | 0.957 | 1.72 | 2.15 | 11 | 17 | 3 | 0 | 100% | 1 |
| 1PPR_PID_N_623 | 89% | 10% | 0.072 | 0.957 | 1.98 | 2.23 | 11 | 17 | 0 | 0 | 100% | 1 |
| 1PPR_PID_M_612 | 88% | 11% | 0.067 | 0.948 | 1.93 | 2.19 | 12 | 19 | 1 | 0 | 100% | 1 |
| 1PPR_PID_M_611 | 86% | 10% | 0.077 | 0.95 | 1.94 | 2.21 | 13 | 15 | 3 | 0 | 100% | 1 |
| 1PPR_PID_N_614 | 86% | 9% | 0.077 | 0.95 | 1.93 | 2.45 | 13 | 17 | 2 | 0 | 100% | 1 |
| 1PPR_PID_M_614 | 86% | 9% | 0.076 | 0.948 | 1.94 | 2.37 | 11 | 16 | 2 | 0 | 100% | 1 |
| 1PPR_PID_O_612 | 84% | 12% | 0.072 | 0.938 | 1.75 | 2.2 | 11 | 18 | 0 | 0 | 100% | 1 |
| 1PPR_PID_N_612 | 83% | 11% | 0.074 | 0.938 | 1.9 | 2.21 | 12 | 19 | 3 | 0 | 100% | 1 |
| 1PPR_PID_N_611 | 83% | 10% | 0.076 | 0.94 | 1.91 | 2.23 | 11 | 18 | 2 | 0 | 100% | 1 |
| 1PPR_PID_O_613 | 81% | 11% | 0.088 | 0.945 | 1.78 | 2.28 | 9 | 17 | 2 | 1 | 100% | 1 |
| 1PPR_PID_M_613 | 75% | 11% | 0.097 | 0.934 | 1.84 | 2.23 | 12 | 16 | 0 | 1 | 100% | 1 |
| 1PPR_PID_N_613 | 74% | 10% | 0.101 | 0.934 | 1.95 | 2.24 | 10 | 15 | 0 | 1 | 100% | 1 |
| 8OV5_PID_O_624 | 100% | 56% | 0.028 | 0.992 | 0.8 | 0.76 | - | - | 2 | 0 | 100% | 1 |
| 2X1Z_PID_M_614 | 99% | 5% | 0.033 | 0.984 | 1.47 | 3.58 | 5 | 26 | 0 | 0 | 100% | 1 |
| 3IIS_PID_M_613 | 99% | 13% | 0.041 | 0.984 | 1.25 | 2.59 | 4 | 19 | 3 | 0 | 100% | 0.74 |
| 2X21_PID_M_613 | 98% | 4% | 0.042 | 0.977 | 1.61 | 3.77 | 12 | 24 | 1 | 0 | 100% | 1 |
| 2X20_PID_M_614 | 98% | 4% | 0.042 | 0.976 | 1.42 | 3.9 | 6 | 18 | 0 | 0 | 100% | 1 |
| 8OW6_PID_A_612 | 100% | 32% | 0.014 | 0.998 | 1.53 | 1.09 | 7 | 5 | 0 | 0 | 100% | 1 |














