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PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE Ligand Definition and Summary of PL9
PL9 is a Ligand Of Interest in 1S5L designated by the RCSB Created with Raphaël 2.3.0 Worse Geometry Better Worse Experiment Data Fitting Better 1S5L_PL9_a_2352 Click to see a 3D electron density view of this ligand instance Created with Raphaël 2.3.0 Worse Geometry Better Worse Experiment Data Fitting Better 1S5L_PL9_a_2352 Click to see a 3D electron density view of this ligand instance Created with Raphaël 2.3.0 Worse Geometry Better Worse Experiment Data Fitting Better 1S5L_PL9_a_2352 Click to see a 3D electron density view of this ligand instance Created with Raphaël 2.3.0
Best-fitted instance in this entry Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
Identifier Ranking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angle Outliers of bond length Outliers of bond angle Atomic clashes Stereochemical errors Model completeness Average occupancy 1S5L_PL9_a_2352 15% 9% 0.155 0.749 2.32 2.21 18 17 0 0 82% 1 1S5L_PL9_A_353 15% 9% 0.163 0.755 2.32 2.18 19 17 9 0 82% 1 1S5L_PL9_d_2358 5% 12% 0.218 0.666 2.37 1.75 19 12 0 0 82% 1 1S5L_PL9_D_357 4% 12% 0.24 0.66 2.32 1.75 18 12 5 0 82% 1 5WS6_PL9_D_405 97% 37% 0.055 0.967 0.69 1.76 2 21 0 0 100% 1 5B5E_PL9_d_406 96% 33% 0.054 0.965 1.05 1.59 4 12 0 0 100% 1 5GTI_PL9_d_405 96% 36% 0.053 0.962 0.64 1.86 2 22 0 0 100% 1 5V2C_PL9_d_407 96% 34% 0.069 0.978 1.27 1.32 8 10 0 0 100% 1 5B66_PL9_D_412 93% 35% 0.077 0.97 1.06 1.51 3 12 0 0 100% 1 1VF5_PL9_Q_1305 98% 4% 0.062 0.984 3.4 2.39 21 16 32 0 100% 1