Ligand validation:1UPB

TPP: THIAMINE DIPHOSPHATE

TPP is a Ligand Of Interest in 1UPB designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1UPB_TPP_B_600	89%	12%	0.096	0.976	2.04	2.08	7	5	10	0	100%	1
1UPB_TPP_D_600	86%	9%	0.105	0.975	2.02	2.36	7	6	11	0	100%	1
1UPB_TPP_C_600	85%	12%	0.107	0.971	1.89	2.14	6	6	9	0	100%	1
1UPB_TPP_A_600	79%	10%	0.123	0.97	2	2.27	7	5	10	0	100%	1
1UPA_TPP_B_600	98%	12%	0.059	0.978	1.88	2.16	6	7	11	0	100%	1
2IHT_TPP_B_600	91%	12%	0.087	0.975	1.85	2.22	7	7	10	0	100%	1
2IHV_TPP_D_600	89%	13%	0.1	0.98	1.73	2.18	5	6	8	0	100%	1
1UPC_TPP_F_600	87%	12%	0.1	0.973	1.87	2.24	6	8	10	0	100%	1
2AG1_TPP_C_622	100%	1%	0.019	0.998	6.24	1.97	6	9	1	0	100%	1
9BT4_TPP_C_302	100%	48%	0.018	0.998	1.1	0.92	2	2	5	0	100%	1
4KXW_TPP_A_1015	100%	39%	0.032	0.998	1.23	1.16	2	4	1	0	100%	1
4KGD_TPP_A_704	100%	22%	0.035	0.997	1.74	1.51	4	7	0	0	100%	0.97
4MPJ_TPP_A_604	100%	28%	0.031	0.991	1.34	1.53	3	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.