2B8Q | pdb_00002b8q


TYD: THYMIDINE-5'-DIPHOSPHATE

TYD is a Ligand Of Interest in 2B8Q designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2B8Q_TYD_C_162 87% 18% 0.079 0.9551.31 2.08 3 1140100%1
2B8Q_TYD_D_163 82% 17% 0.083 0.9411.32 2.12 2 1120100%1
2B8Q_TYD_B_161 80% 18% 0.087 0.9391.31 2.09 3 1230100%1
2B8Q_TYD_A_160 79% 18% 0.086 0.9361.33 2.09 3 1130100%1
2B8Q_TYD_F_165 79% 17% 0.089 0.9381.32 2.14 2 1140100%1
2B8Q_TYD_E_164 70% 18% 0.094 0.9131.33 2.1 3 1140100%1
3FBF_TYD_A_138 92% 19% 0.062 0.9571.46 1.86 6 750100%1
3EVW_TYD_C_138 90% 18% 0.072 0.9611.46 1.92 5 940100%1
3FBC_TYD_C_138 49% 20% 0.119 0.8641.42 1.85 4 720100%1
2PAM_TYD_B_140 100% 31% 0.019 0.9971.5 1.17 1 510100%1
5TPU_TYD_A_200 100% 21% 0.022 0.9951.32 1.86 3 1400100%1
3EVO_TYD_A_160 100% 21% 0.036 0.991.41 1.81 4 700100%1
3OTI_TYD_B_377 100% 24% 0.035 0.9891.33 1.66 4 700100%1
1PN3_TYD_A_406 99% 53% 0.04 0.9910.96 0.74 1 150100%1