GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2BO7 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2BO7_GDP_B_1383 | 90% | 25% | 0.077 | 0.966 | 1.24 | 1.68 | 4 | 8 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_A_1383 | 87% | 22% | 0.083 | 0.96 | 1.33 | 1.79 | 4 | 8 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_E_1383 | 82% | 24% | 0.092 | 0.951 | 1.3 | 1.71 | 3 | 8 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_C_1383 | 77% | 26% | 0.102 | 0.944 | 1.22 | 1.68 | 4 | 6 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_D_1383 | 64% | 26% | 0.125 | 0.926 | 1.17 | 1.71 | 3 | 7 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_G_1383 | 38% | 24% | 0.159 | 0.861 | 1.16 | 1.83 | 3 | 8 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_I_1383 | 32% | 26% | 0.16 | 0.833 | 1.12 | 1.75 | 3 | 8 | 5 | 0 | 100% | 1 |
| 2BO7_GDP_H_1383 | 31% | 26% | 0.156 | 0.823 | 1.17 | 1.71 | 3 | 8 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_J_1383 | 26% | 28% | 0.17 | 0.813 | 1.14 | 1.64 | 4 | 7 | 4 | 0 | 100% | 1 |
| 2BO7_GDP_F_1383 | 3% | 26% | 0.219 | 0.554 | 1.11 | 1.75 | 3 | 7 | 4 | 0 | 100% | 1 |
| 2Y4L_GDP_A_401 | 95% | 20% | 0.059 | 0.972 | 1.27 | 1.95 | 3 | 12 | 0 | 0 | 100% | 1 |
| 2Y4K_GDP_A_401 | 62% | 27% | 0.109 | 0.902 | 1.14 | 1.71 | 2 | 8 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
