PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 2NV9 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2NV9_PLP_D_2004Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2NV9_PLP_D_2004Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2NV9_PLP_D_2004 83% 27% 0.11 0.971.68 1.27 1 260100%1
2NV9_PLP_B_2002 77% 30% 0.121 0.9621.74 1.09 3 -100100%1
2NV9_PLP_E_2005 74% 23% 0.134 0.9631.66 1.55 2 470100%1
2NV9_PLP_G_2007 72% 30% 0.131 0.9561.59 1.23 2 480100%1
2NV9_PLP_H_2008 70% 33% 0.134 0.9511.75 0.93 1 190100%1
2NV9_PLP_A_2001 70% 27% 0.139 0.9561.79 1.16 3 290100%1
2NV9_PLP_C_2003 68% 32% 0.143 0.9551.63 1.07 3 -80100%1
2NV9_PLP_F_2006 67% 28% 0.142 0.9511.93 0.99 2 190100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
2BIE_PLP_B_1361 100% 28% 0.039 0.9891.48 1.39 4 310100%1
4NOG_PLP_A_501 100% 38% 0.042 0.9921.24 1.18 3 100100%1
3WQC_PLP_B_402 100% 21% 0.045 0.9931.96 1.38 4 400100%1
4HT3_PLP_B_401 100% 15% 0.045 0.9932.04 1.72 3 500100%1