NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 2PD3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2PD3_NAD_B_2780 | 76% | 18% | 0.083 | 0.921 | 1.79 | 1.65 | 6 | 10 | 8 | 0 | 100% | 1 |
| 2PD3_NAD_D_4780 | 71% | 17% | 0.088 | 0.91 | 1.79 | 1.76 | 7 | 13 | 5 | 0 | 100% | 1 |
| 2PD3_NAD_A_1780 | 68% | 18% | 0.088 | 0.898 | 1.74 | 1.71 | 4 | 11 | 2 | 0 | 100% | 1 |
| 2PD3_NAD_C_3780 | 63% | 18% | 0.098 | 0.892 | 1.76 | 1.71 | 6 | 12 | 2 | 0 | 100% | 1 |
| 8JFM_NAD_E_301 | 98% | 53% | 0.043 | 0.98 | 0.79 | 0.9 | - | 3 | 0 | 0 | 100% | 1 |
| 8JFN_NAD_A_301 | 96% | 14% | 0.06 | 0.975 | 1.78 | 2 | 9 | 17 | 2 | 0 | 100% | 1 |
| 2PD4_NAD_D_4780 | 80% | 19% | 0.08 | 0.933 | 1.7 | 1.68 | 3 | 13 | 3 | 1 | 100% | 1 |
| 1DBV_NAD_O_336 | 100% | 18% | 0.012 | 0.999 | 1.39 | 1.98 | 5 | 12 | 0 | 0 | 100% | 1 |
| 1HZJ_NAD_A_400 | 100% | 22% | 0.009 | 0.999 | 1.43 | 1.7 | 8 | 8 | 1 | 0 | 100% | 1 |
| 1OWB_NAD_A_3000 | 100% | 7% | 0.015 | 0.998 | 2.36 | 2.37 | 10 | 13 | 1 | 0 | 100% | 1 |
| 2NAD_NAD_B_394 | 100% | 7% | 0.016 | 0.997 | 2.25 | 2.54 | 14 | 23 | 3 | 0 | 100% | 1 |
| 2QG4_NAD_F_500 | 100% | 19% | 0.017 | 0.998 | 1.81 | 1.58 | 4 | 9 | 0 | 0 | 100% | 1 |
