U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 2QCD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 2QCD_U5P_A_1 | 97% | 26% | 0.052 | 0.979 | 1.25 | 1.62 | 3 | 7 | 0 | 0 | 100% | 1 |
| 2QCD_U5P_B_2 | 96% | 26% | 0.058 | 0.974 | 1.17 | 1.71 | 2 | 10 | 0 | 0 | 100% | 1 |
| 7OQM_U5P_B_504 | 100% | 70% | 0.015 | 0.999 | 0.41 | 0.59 | - | - | 0 | 0 | 100% | 1 |
| 7OQI_U5P_B_505 | 100% | 69% | 0.017 | 0.998 | 0.45 | 0.6 | - | - | 0 | 0 | 100% | 0.81 |
| 7OQN_U5P_A_504 | 100% | 69% | 0.017 | 0.998 | 0.43 | 0.6 | - | - | 0 | 0 | 100% | 1 |
| 3EX3_U5P_B_481 | 100% | 14% | 0.018 | 0.997 | 1.6 | 2.16 | 5 | 11 | 0 | 0 | 100% | 1 |
| 7OQK_U5P_A_505 | 100% | 68% | 0.018 | 0.998 | 0.48 | 0.61 | - | - | 0 | 0 | 100% | 0.59 |
| 2E6Y_U5P_A_301 | 100% | 42% | 0.013 | 0.998 | 1.29 | 0.86 | 3 | - | 0 | 0 | 100% | 1 |
| 3W07_U5P_A_301 | 100% | 51% | 0.018 | 0.997 | 0.8 | 0.97 | - | - | 3 | 0 | 100% | 1 |