UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2VCH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VCH_UDP_A_1477 | 100% | 42% | 0.027 | 0.993 | 1 | 1.14 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2VG8_UDP_A_1477 | 100% | 33% | 0.033 | 0.99 | 1.07 | 1.47 | 3 | 5 | 0 | 0 | 100% | 1 |
| 5F87_UDP_C_501 | 100% | 26% | 0.015 | 0.999 | 1.25 | 1.62 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
