SOG: octyl 1-thio-beta-D-glucopyranoside
SOG is a Ligand Of Interest in 2YDO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2YDO_SOG_A_501 | 7% | 54% | 0.378 | 0.844 | 0.88 | 0.9 | 1 | 1 | 0 | 0 | 100% | 1 |
| 2YDO_SOG_A_502 | 0% | 44% | 0.44 | 0.488 | 1.09 | 1.07 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5G53_SOG_A_501 | 54% | 39% | 0.17 | 0.937 | 1.01 | 1.37 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2YDV_SOG_A_501 | 44% | 57% | 0.156 | 0.882 | 0.81 | 0.83 | 1 | - | 3 | 0 | 100% | 1 |
| 6TOS_SOG_B_406 | 70% | 81% | 0.109 | 0.927 | 0.31 | 0.51 | - | - | 0 | 0 | 100% | 1 |
| 2VT4_SOG_A_403 | 67% | 60% | 0.141 | 0.95 | 0.59 | 0.92 | - | - | 0 | 0 | 100% | 1 |
| 6YU6_SOG_A_507 | 64% | 91% | 0.138 | 0.937 | 0.18 | 0.39 | - | - | 3 | 0 | 100% | 1 |
| 6TOT_SOG_A_405 | 55% | 44% | 0.159 | 0.929 | 0.91 | 1.24 | 1 | 1 | 0 | 0 | 100% | 1 |
| 3VHZ_SOG_A_430 | 53% | 27% | 0.144 | 0.906 | 1.73 | 1.21 | 5 | 2 | 0 | 0 | 100% | 1 |
