UTP: URIDINE 5'-TRIPHOSPHATE

UTP is a Ligand Of Interest in 2YU9 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YU9_UTP_A_2003Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YU9_UTP_A_2003Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YU9_UTP_A_2003Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2YU9_UTP_A_2003 6% 24% 0.384 0.8241.68 1.47 4 3180100%1
2NVZ_UTP_B_3000 62% 19% 0.164 0.9562.08 1.39 4 440100%1
3HIY_UTP_B_502 100% 19% 0.028 0.9941.43 2.03 2 670100%1
4JST_UTP_B_202 98% 24% 0.052 0.9780.97 2.09 1 300100%1
5VZE_UTP_A_505 97% 36% 0.066 0.9831.1 1.4 1 300100%1
5VZH_UTP_A_506 96% 45% 0.081 0.9880.93 1.17 1 200100%1
7X4Q_UTP_B_401 96% 6% 0.081 0.9883.79 1.25 5 200100%1