2ZDH | pdb_00002zdh


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 2ZDH designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZDH_ADP_A_701Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZDH_ADP_A_701Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2ZDH_ADP_A_701Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2ZDH_ADP_A_701 86% 33% 0.1 0.971.14 1.52 2 400100%1
2ZDH_ADP_C_703 84% 29% 0.104 0.9651.24 1.58 2 500100%1
2ZDH_ADP_B_702 83% 32% 0.108 0.9681.16 1.54 2 400100%1
2ZDH_ADP_D_704 76% 27% 0.121 0.9581.29 1.62 2 400100%1
6U1K_ADP_B_406 91% 42% 0.081 0.9690.94 1.28 1 400100%1
2ZDG_ADP_C_403 88% 26% 0.1 0.9751.37 1.63 2 400100%1
6U1J_ADP_C_407 63% 40% 0.144 0.9391 1.33 1 400100%0.91
6U1I_ADP_C_404 59% 39% 0.16 0.9420.97 1.39 1 400100%0.9
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1