PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE

PGV is a Ligand Of Interest in 3ASO designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3ASO_PGV_A_522Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3ASO_PGV_A_522Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3ASO_PGV_A_522Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3ASO_PGV_A_522 63% 49% 0.172 0.970.81 1.14 2 210100%1
3ASO_PGV_N_1266 63% 46% 0.171 0.9660.85 1.24 2 520100%1
3ASO_PGV_P_1267 61% 51% 0.181 0.970.77 1.13 1 520100%1
3ASO_PGV_C_267 59% 50% 0.182 0.9650.81 1.12 2 560100%1
3ASO_PGV_A_524 6% 43% 0.301 0.7391.18 1.04 2 5110100%1
3ASO_PGV_N_1524 4% 44% 0.34 0.7041.03 1.15 2 4120100%1
3ASO_PGV_C_268 2% 37% 0.32 0.6071.2 1.28 2 430100%1
3ASO_PGV_P_1268 2% 37% 0.343 0.5881.18 1.31 2 540100%1
5B1A_PGV_P_303 98% 35% 0.064 0.9851.06 1.51 3 1380100%1
5X1B_PGV_C_302 95% 52% 0.078 0.9810.92 0.93 2 400100%1
5B1B_PGV_C_302 94% 56% 0.078 0.9790.81 0.87 1 130100%1
7YPY_PGV_P_302 94% 54% 0.079 0.9780.79 0.99 2 210100%1
5ZCQ_PGV_N_608 90% 32% 0.094 0.9781.15 1.53 5 810100%1
7VUW_PGV_A_608 90% 48% 0.096 0.9790.89 1.12 2 310100%1