U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 3G1D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3G1D_U5P_B_229 | 89% | 46% | 0.071 | 0.949 | 1.15 | 0.94 | 1 | 2 | 0 | 0 | 100% | 1 |
3G1D_U5P_A_229 | 85% | 49% | 0.074 | 0.94 | 1.05 | 0.93 | 1 | 1 | 0 | 0 | 100% | 1 |
3G1X_U5P_B_230 | 100% | 47% | 0.022 | 0.995 | 1.12 | 0.95 | 2 | 2 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |
3G22_U5P_B_229 | 99% | 49% | 0.042 | 0.98 | 1.08 | 0.91 | 2 | 2 | 0 | 0 | 100% | 1 |
1LOQ_U5P_A_2001 | 99% | 53% | 0.044 | 0.981 | 0.85 | 0.97 | - | 1 | 0 | 0 | 100% | 1 |
4NUW_U5P_B_301 | 87% | 17% | 0.092 | 0.965 | 1.84 | 1.81 | 2 | 7 | 0 | 0 | 100% | 1 |
6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
6ZWY_U5P_A_501 | 100% | 44% | 0.048 | 0.994 | 0.99 | 1.17 | 1 | 1 | 0 | 0 | 100% | 1 |