MD1: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER
MD1 is a Ligand Of Interest in 3IR7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3IR7_MD1_A_1251 | 77% | 10% | 0.093 | 0.935 | 2.83 | 1.41 | 6 | 5 | 4 | 0 | 100% | 1 |
| 3IR7_MD1_A_1247 | 76% | 10% | 0.096 | 0.934 | 2.94 | 1.31 | 7 | 4 | 6 | 0 | 100% | 1 |
| 1Y5L_MD1_A_2800 | 94% | 11% | 0.063 | 0.971 | 2.78 | 1.42 | 6 | 4 | 2 | 0 | 100% | 1 |
| 1Y4Z_MD1_A_1800 | 92% | 11% | 0.066 | 0.962 | 2.74 | 1.45 | 9 | 8 | 7 | 0 | 100% | 1 |
| 1Y5I_MD1_A_2800 | 92% | 10% | 0.063 | 0.958 | 2.88 | 1.4 | 8 | 7 | 2 | 0 | 100% | 1 |
| 3EGW_MD1_A_1245 | 90% | 11% | 0.066 | 0.954 | 2.84 | 1.31 | 6 | 3 | 5 | 0 | 100% | 1 |
| 1Y5N_MD1_A_2800 | 88% | 11% | 0.075 | 0.954 | 2.77 | 1.43 | 5 | 5 | 2 | 0 | 100% | 1 |
| 5E7O_MD1_E_1004 | 100% | 4% | 0.021 | 0.997 | 3.87 | 1.7 | 19 | 12 | 1 | 0 | 100% | 1 |
| 5CH7_MD1_E_1004 | 98% | 10% | 0.047 | 0.982 | 2.56 | 1.66 | 12 | 14 | 1 | 0 | 100% | 1 |
| 5CHC_MD1_E_1004 | 98% | 9% | 0.051 | 0.981 | 2.68 | 1.78 | 13 | 15 | 4 | 0 | 100% | 1 |
| 4YDD_MD1_A_1004 | 97% | 7% | 0.053 | 0.975 | 3.16 | 1.61 | 16 | 13 | 8 | 0 | 100% | 1 |
| 2IVF_MD1_A_1987 | 92% | 15% | 0.079 | 0.977 | 2.17 | 1.53 | 6 | 10 | 6 | 1 | 100% | 1 |
