Ligand validation:3LVM

PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 3LVM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3LVM_PLP_A_764	63%	34%	0.136	0.932	1.37	1.22	2	3	0	0	100%	0.9375
3LVM_PLP_B_764	59%	39%	0.142	0.923	1.28	1.09	2	1	0	0	100%	0.9375
1P3W_PLP_B_764	80%	5%	0.113	0.961	1.9	3.49	3	10	0	0	100%	0.9375
3LVL_PLP_B_764	80%	18%	0.113	0.961	2.3	1.27	2	2	1	0	100%	0.9375
3LVJ_PLP_A_764	29%	43%	0.238	0.896	1.01	1.21	-	1	1	0	100%	0.9375
3LVK_PLP_A_764	9%	41%	0.343	0.829	0.87	1.39	-	1	3	0	100%	0.9375
1EKV_PLP_A_370	100%	19%	0.019	0.998	2	1.45	5	4	1	0	94%	0.9375
2BIE_PLP_B_1361	100%	28%	0.039	0.989	1.48	1.39	4	3	1	0	100%	0.9375
4NOG_PLP_A_501	100%	38%	0.042	0.992	1.24	1.18	3	1	0	0	100%	1
3WQC_PLP_B_402	100%	21%	0.045	0.993	1.96	1.38	4	4	0	0	100%	0.9375
4HT3_PLP_B_401	100%	15%	0.045	0.993	2.04	1.72	3	5	0	0	100%	0.9375

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.