Ligand validation:3QD6

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3QD6 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3QD6_NAG_B_1411	42%	60%	0.165	0.882	0.78	0.75	1	-	2	0	100%	0.9333
3QD6_NAG_A_1411	29%	55%	0.228	0.886	0.74	0.98	1	1	0	0	100%	0.9333
3QD6_NAG_D_1411	21%	58%	0.227	0.835	0.89	0.74	1	-	0	0	100%	0.9333
3QD6_NAG_F_1411	6%	53%	0.332	0.758	1.03	0.78	1	-	3	0	100%	0.9333
3QD6_NAG_E_1411	6%	40%	0.344	0.77	0.9	1.41	1	3	1	0	100%	0.9333
3QD6_NAG_C_1411	2%	57%	0.487	0.728	0.77	0.9	-	1	1	0	100%	0.9333
3LKJ_NAG_A_2	50%	29%	0.157	0.907	0.53	2.24	-	6	1	0	100%	0.9333
7SGM_NAG_C_301	24%	27%	0.211	0.841	0.82	2.1	-	3	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.