UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3S29 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3S29_UDP_A_901 | 99% | 32% | 0.039 | 0.99 | 0.99 | 1.6 | - | 5 | 1 | 0 | 100% | 1 |
| 3S29_UDP_G_901 | 99% | 30% | 0.039 | 0.988 | 1.04 | 1.64 | 1 | 6 | 1 | 0 | 100% | 1 |
| 3S29_UDP_F_901 | 99% | 29% | 0.041 | 0.989 | 1.04 | 1.7 | 1 | 7 | 1 | 0 | 100% | 1 |
| 3S29_UDP_H_901 | 99% | 30% | 0.043 | 0.986 | 1.1 | 1.6 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3S29_UDP_D_901 | 99% | 30% | 0.043 | 0.985 | 1.09 | 1.6 | 1 | 4 | 0 | 0 | 100% | 1 |
| 3S29_UDP_B_901 | 99% | 33% | 0.045 | 0.985 | 1.09 | 1.46 | 2 | 4 | 2 | 0 | 100% | 1 |
| 3S29_UDP_E_901 | 98% | 31% | 0.049 | 0.984 | 1.09 | 1.54 | 2 | 6 | 1 | 0 | 100% | 1 |
| 3S29_UDP_C_901 | 98% | 29% | 0.05 | 0.984 | 1.07 | 1.65 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3S28_UDP_A_901 | 100% | 30% | 0.036 | 0.99 | 0.98 | 1.71 | - | 6 | 3 | 0 | 100% | 1 |
| 3S27_UDP_A_901 | 99% | 28% | 0.042 | 0.99 | 1.04 | 1.71 | - | 6 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
