3THD | pdb_00003thd


DGJ: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol

DGJ is a Ligand Of Interest in 3THD designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3THD_DGJ_D_900 100% 9% 0.018 0.9961.2 3.1 1 610100%1
3THD_DGJ_A_900 100% 10% 0.023 0.9951.28 2.81 2 600100%1
3THD_DGJ_B_900 100% 8% 0.023 0.9951.78 2.64 3 500100%1
3THD_DGJ_C_900 100% 15% 0.024 0.9951.67 2.01 3 700100%1
4DO5_DGJ_A_509 99% 55% 0.035 0.9860.26 1.28 - 200100%1
4CU8_DGJ_A_1985 99% 37% 0.039 0.9871.27 1.12 1 110100%1
4D1J_DGJ_A_600 99% 47% 0.039 0.9840.89 1.04 1 -00100%1
4UFM_DGJ_A_1001 95% 78% 0.058 0.9690.16 0.64 - -00100%1
3S5Y_DGJ_A_801 94% 37% 0.061 0.9660.78 1.58 - 100100%1