CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 3LW5 designated by the RCSB


Created with Raphaƫl 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3LW5_CLA_B_1210Click to see a 3Delectron density viewof this ligand instance
Created with Raphaƫl 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3LW5_CLA_B_1210Click to see a 3Delectron density viewof this ligand instance
Created with Raphaƫl 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3LW5_CLA_B_1210Click to see a 3Delectron density viewof this ligand instance
Created with Raphaƫl 2.3.0
Best-fitted instance in this entry
Created with Raphaƫl 2.3.0
Other instances in this entry
Created with Raphaƫl 2.3.0
Best-fitted instance in this entry
Created with Raphaƫl 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaƫl 2.3.0
Best-fitted instance in this entry
Created with Raphaƫl 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3LW5_CLA_B_1210 30% 9% 0.234 0.8982.23 2.2 13 20 212100%1
3LW5_CLA_B_1203 30% 8% 0.243 0.9072.24 2.47 15 26 252100%1
3LW5_CLA_B_1221 29% 7% 0.223 0.9112.45 2.43 15 22 23183%1
3LW5_CLA_A_9011 29% 10% 0.256 0.9142.17 2.18 16 20 152100%1
3LW5_CLA_B_9010 26% 9% 0.251 0.8942.15 2.27 16 24 182100%1
3LW5_CLA_A_1129 25% 5% 0.204 0.8832.49 2.7 14 20 8177%1
3LW5_CLA_A_9012 25% 9% 0.253 0.892.22 2.23 14 21 462100%1
3LW5_CLA_B_1220 25% 6% 0.237 0.8732.55 2.4 20 22 711100%1
3LW5_CLA_A_1122 25% 7% 0.222 0.8842.39 2.4 13 20 24285%1
3LW5_CLA_B_1202 25% 7% 0.252 0.8862.21 2.57 13 20 362100%1
3LW5_CLA_A_9013 25% 8% 0.251 0.8852.32 2.34 16 21 352100%1
3LW5_CLA_B_1205 24% 8% 0.262 0.8932.22 2.36 13 19 362100%1
3LW5_CLA_A_1125 24% 10% 0.238 0.8662.2 2.17 14 15712100%1
3LW5_CLA_A_1131 23% 9% 0.254 0.8812.22 2.22 14 20 392100%1
3LW5_CLA_B_1227 23% 6% 0.227 0.8942.59 2.39 12 19 14177%1
3LW5_CLA_A_9022 23% 9% 0.275 0.8992.19 2.33 13 20 412100%1
3LW5_CLA_A_1136 22% 9% 0.268 0.8882.18 2.25 13 19 292100%1
3LW5_CLA_A_1106 22% 9% 0.289 0.9072.17 2.35 14 22 292100%1
3LW5_CLA_B_1235 22% 10% 0.263 0.882.13 2.21 13 15672100%1
3LW5_CLA_B_1214 22% 9% 0.239 0.8722.3 2.21 13 18 27291%1
3LW5_CLA_B_1224 22% 7% 0.266 0.8822.27 2.5 13 20 212100%1
3LW5_CLA_A_9023 22% 9% 0.27 0.8862.26 2.22 14 22 662100%1
3LW5_CLA_A_1137 22% 6% 0.236 0.92.57 2.55 14 18 11172%1
3LW5_CLA_A_1127 21% 7% 0.247 0.8872.34 2.43 14 18 16285%1
3LW5_CLA_A_1139 21% 6% 0.228 0.8762.5 2.55 14 20 37178%1
3LW5_CLA_A_1101 20% 5% 0.228 0.8732.44 2.75 13 19 16177%1
3LW5_CLA_B_1215 20% 9% 0.267 0.8852.24 2.3 14 21 13292%1
3LW5_CLA_A_1104 19% 8% 0.267 0.8882.29 2.42 13 20 19288%1
3LW5_CLA_B_1206 19% 10% 0.273 0.872.13 2.19 14 18 222100%1
3LW5_CLA_A_1132 18% 8% 0.271 0.8622.22 2.45 12 23 222100%1
3LW5_CLA_B_1228 18% 6% 0.23 0.8612.4 2.59 12 21 21177%1
3LW5_CLA_B_1225 18% 8% 0.289 0.8782.19 2.44 15 21 312100%1
3LW5_CLA_A_1126 18% 9% 0.295 0.8842.16 2.37 12 24 522100%1
3LW5_CLA_A_1128 18% 8% 0.272 0.862.17 2.45 15 21 242100%1
3LW5_CLA_A_1107 18% 7% 0.259 0.8732.35 2.51 12 24 46285%1
3LW5_CLA_B_1238 18% 9% 0.273 0.8582.19 2.34 13 22 252100%1
3LW5_CLA_A_1133 18% 6% 0.231 0.8562.49 2.48 14 18 35177%1
3LW5_CLA_B_1219 17% 7% 0.24 0.8492.52 2.32 14 1616285%1
3LW5_CLA_I_1204 17% 8% 0.245 0.8382.26 2.36 12 167292%1
3LW5_CLA_4_4002 17% 4% 0.212 0.8262.7 3.14 20 31 32280%1
3LW5_CLA_A_1237 17% 9% 0.281 0.8592.17 2.36 14 22 352100%1
3LW5_CLA_4_1009 17% 2% 0.199 0.8532.95 3.66 11 20 3155%1
3LW5_CLA_A_1115 16% 8% 0.239 0.812.23 2.33 14 20 922100%1
3LW5_CLA_A_1140 16% 10% 0.277 0.8482.16 2.16 14 20 522100%1
3LW5_CLA_2_4009 16% 8% 0.231 0.7992.2 2.47 14 21 112100%1
3LW5_CLA_B_1239 16% 10% 0.299 0.8692.12 2.14 15 19 242100%1
3LW5_CLA_L_1501 16% 6% 0.244 0.8542.49 2.46 14 20 20177%1
3LW5_CLA_4_4011 16% 5% 0.183 0.862.2 3.25 7 19 2138%1
3LW5_CLA_4_4012 16% 3% 0.209 0.8562.77 3.57 12 18 7155%1
3LW5_CLA_1_1012 16% 3% 0.218 0.8652.75 3.33 10 162155%1
3LW5_CLA_B_1226 16% 8% 0.31 0.8782.16 2.44 15 21 252100%1
3LW5_CLA_F_1240 15% 4% 0.228 0.8722.75 3.05 10 22 0155%1
3LW5_CLA_A_1124 15% 9% 0.28 0.8442.16 2.27 13 20 692100%1
3LW5_CLA_B_1208 15% 5% 0.258 0.8512.57 2.86 12 25 10283%1
3LW5_CLA_A_1103 15% 9% 0.286 0.8462.18 2.28 14 21 222100%1
3LW5_CLA_B_1234 15% 7% 0.277 0.852.25 2.57 12 1515292%1
3LW5_CLA_A_1138 14% 9% 0.29 0.8462.2 2.21 14 20 382100%1
3LW5_CLA_B_1216 14% 8% 0.278 0.8432.19 2.39 15 19 16294%1
3LW5_CLA_A_1109 14% 9% 0.285 0.8372.18 2.35 13 20 202100%1
3LW5_CLA_B_1236 14% 6% 0.279 0.8812.53 2.56 15 1724172%1
3LW5_CLA_B_1209 14% 7% 0.254 0.832.32 2.46 14 18 16285%1
3LW5_CLA_B_1229 14% 7% 0.272 0.822.24 2.5 12 20 232100%1
3LW5_CLA_B_1217 13% 6% 0.255 0.8422.4 2.6 13 20 11177%1
3LW5_CLA_A_1111 13% 7% 0.263 0.8372.32 2.48 13 22 22183%1
3LW5_CLA_4_4013 13% 7% 0.186 0.8382.02 2.86 9 1711138%1
3LW5_CLA_J_1308 13% 6% 0.228 0.7952.46 2.63 18 22 53285%1
3LW5_CLA_1_1002 13% 6% 0.228 0.8132.57 2.6 12 20 12172%1
3LW5_CLA_L_1130 12% 9% 0.28 0.8142.23 2.2 12 21 292100%1
3LW5_CLA_L_1502 12% 5% 0.248 0.8312.55 2.84 11 20 30172%1
3LW5_CLA_A_1135 12% 7% 0.268 0.842.49 2.44 14 19 29178%1
3LW5_CLA_A_1110 12% 8% 0.248 0.812.39 2.29 13 174183%1
3LW5_CLA_A_1117 12% 10% 0.308 0.8412.19 2.16 14 20 332100%1
3LW5_CLA_1_1005 12% 5% 0.233 0.8162.84 2.52 13 179171%1
3LW5_CLA_H_1207 12% 8% 0.28 0.8072.24 2.31 13 19 282100%1
3LW5_CLA_4_4006 12% 7% 0.231 0.7842.39 2.4 12 19 15285%1
3LW5_CLA_3_2009 12% 7% 0.233 0.7832.46 2.44 17 21 49286%1
3LW5_CLA_A_1123 11% 11% 0.305 0.8292.1 2.1 12 18 332100%1
3LW5_CLA_H_1145 11% 8% 0.239 0.7592.15 2.46 14 20 443100%1
3LW5_CLA_2_2012 11% 6% 0.255 0.8172.47 2.64 12 18 20177%1
3LW5_CLA_B_1211 11% 10% 0.306 0.8262.22 2.14 13 20 202100%1
3LW5_CLA_1_1011 11% 2% 0.223 0.8213.1 4.04 15 19 6155%1
3LW5_CLA_2_2002 11% 7% 0.233 0.7742.36 2.55 12 25 29286%1
3LW5_CLA_L_1503 11% 4% 0.251 0.8062.6 2.94 17 20 15277%1
3LW5_CLA_3_3013 10% 6% 0.259 0.7672.33 2.66 18 19 252100%1
3LW5_CLA_1_1007 10% 8% 0.258 0.7762.28 2.3 14 20 25294%1
3LW5_CLA_B_1230 10% 5% 0.28 0.8262.53 2.73 17 19 23177%1
3LW5_CLA_B_1223 10% 10% 0.318 0.8182.19 2.19 14 21 432100%1
3LW5_CLA_3_3017 9% 4% 0.229 0.7582.53 3.01 13 26 8177%1
3LW5_CLA_R_1144 9% 7% 0.246 0.7562.34 2.53 12 22 17288%1
3LW5_CLA_B_1231 8% 5% 0.282 0.8072.68 2.68 14 1717169%1
3LW5_CLA_K_1143 8% 6% 0.26 0.7692.48 2.54 13 21 36177%1
3LW5_CLA_A_1119 8% 9% 0.346 0.8152.18 2.36 12 20 472100%1
3LW5_CLA_R_1150 7% 8% 0.285 0.7492.29 2.29 13 21 52100%1
3LW5_CLA_B_1201 7% 5% 0.279 0.7982.64 2.72 13 1614169%1
3LW5_CLA_A_1102 7% 8% 0.3 0.7912.38 2.29 13 21 23285%1
3LW5_CLA_A_1116 7% 6% 0.28 0.7772.51 2.6 12 20 13180%1
3LW5_CLA_3_3004 7% 4% 0.197 0.7652.29 3.21 11 167138%1
3LW5_CLA_4_1304 7% 6% 0.261 0.7172.34 2.81 19 28 423100%1
3LW5_CLA_K_1146 7% 5% 0.271 0.7672.69 2.73 18 23 13177%1
3LW5_CLA_1_1003 7% 5% 0.24 0.7432.53 2.83 11 19 5172%1
3LW5_CLA_A_1121 7% 5% 0.243 0.7562.62 2.82 11 158165%1
3LW5_CLA_2_2004 7% 7% 0.258 0.7462.47 2.35 13 18 19177%1
3LW5_CLA_4_4010 7% 5% 0.225 0.7812.09 3.16 9 172138%1
3LW5_CLA_J_1311 7% 8% 0.273 0.7292.26 2.39 13 19 32294%1
3LW5_CLA_A_1141 7% 9% 0.264 0.7082.2 2.27 13 19 452100%1
3LW5_CLA_4_1004 6% 6% 0.259 0.7262.47 2.51 16 20 40285%1
3LW5_CLA_1_1014 6% 7% 0.268 0.7182.36 2.38 16 1632294%1
3LW5_CLA_3_3011 6% 10% 0.297 0.7362.14 2.14 13 20 192100%1
3LW5_CLA_A_1120 6% 6% 0.369 0.8482.49 2.59 13 20 14178%1
3LW5_CLA_3_3006 6% 5% 0.21 0.7522.1 3.16 9 19 9138%1
3LW5_CLA_A_1108 6% 5% 0.291 0.7752.66 2.73 13 18 7169%1
3LW5_CLA_H_1241 6% 7% 0.261 0.7162.42 2.4 11 22 13285%1
3LW5_CLA_2_2013 6% 5% 0.268 0.7372.53 2.7 12 18 7177%1
3LW5_CLA_B_1218 6% 5% 0.305 0.782.5 2.83 12 1624171%1
3LW5_CLA_B_1222 5% 8% 0.346 0.7872.32 2.39 14 21 47289%1
3LW5_CLA_F_1302 5% 5% 0.252 0.7332.74 2.72 13 1713163%1
3LW5_CLA_A_1134 5% 5% 0.263 0.7322.59 2.71 13 1721169%1
3LW5_CLA_1_1303 5% 4% 0.321 0.7742.74 2.9 20 23 16378%1
3LW5_CLA_A_1113 5% 6% 0.306 0.7542.56 2.45 12 23 13177%1
3LW5_CLA_B_1212 5% 10% 0.322 0.742.23 2.14 12 19 16292%1
3LW5_CLA_3_3001 5% 5% 0.281 0.7932.17 3.16 9 19 0138%1
3LW5_CLA_L_1148 5% 4% 0.316 0.7422.66 3.17 23 27 42385%1
3LW5_CLA_3_1147 5% 3% 0.285 0.7353.08 2.87 20 27 22171%1
3LW5_CLA_A_1149 5% 2% 0.315 0.7632.78 3.91 14 28 14371%1
3LW5_CLA_1_1001 4% 3% 0.273 0.7172.77 3.28 18 24 18171%1
3LW5_CLA_4_4005 4% 5% 0.274 0.7752.12 3.21 8 170138%1
3LW5_CLA_2_2008 4% 5% 0.224 0.7192.12 3.11 7 170138%1
3LW5_CLA_2_2006 4% 9% 0.383 0.772.19 2.34 12 15112100%1
3LW5_CLA_1_1010 4% 3% 0.259 0.6952.87 3.1 18 26 15171%1
3LW5_CLA_2_2010 4% 6% 0.28 0.7722.1 2.96 8 170138%1
3LW5_CLA_B_1301 4% 2% 0.302 0.7642.86 3.54 12 22 6155%1
3LW5_CLA_4_4007 4% 7% 0.294 0.7042.45 2.47 12 21 0180%1
3LW5_CLA_3_3002 4% 5% 0.267 0.752.18 3.03 7 160138%1
3LW5_CLA_K_1142 4% 6% 0.248 0.6712.58 2.59 13 1616169%1
3LW5_CLA_2_2007 4% 9% 0.301 0.6662.16 2.3 11 21 222100%1
3LW5_CLA_3_3010 4% 5% 0.227 0.72.11 3.09 10 165138%1
3LW5_CLA_4_1306 4% 7% 0.316 0.7082.35 2.5 13 19 27285%1
3LW5_CLA_2_2001 4% 7% 0.259 0.6592.45 2.47 13 19 24178%1
3LW5_CLA_1_1015 4% 5% 0.237 0.7082.14 3.07 8 18 3138%1
3LW5_CLA_1_1008 4% 4% 0.349 0.7492.55 3.1 14 21 15278%1
3LW5_CLA_3_3007 3% 5% 0.321 0.7342.55 2.73 10 18 2165%1
3LW5_CLA_3_3008 3% 5% 0.349 0.742.51 2.74 15 21 30177%1
3LW5_CLA_A_1105 3% 6% 0.37 0.7652.5 2.52 12 19 27171%1
3LW5_CLA_K_3009 3% 9% 0.368 0.7072.22 2.19 13 21 42100%1
3LW5_CLA_4_4014 3% 5% 0.277 0.6482.49 2.87 15 19 12172%1
3LW5_CLA_3_3003 3% 3% 0.338 0.7422.77 3.21 11 167155%1
3LW5_CLA_4_4015 2% 6% 0.363 0.7272.59 2.56 18 18 8171%1
3LW5_CLA_A_1151 2% 7% 0.368 0.7212.51 2.39 12 18 21177%1
3LW5_CLA_2_2005 2% 5% 0.248 0.6662.12 3.1 9 18 0138%1
3LW5_CLA_4_4003 2% 8% 0.293 0.6282.42 2.31 13 174285%1
3LW5_CLA_2_2014 2% 7% 0.325 0.6432.29 2.51 17 23 57294%1
3LW5_CLA_G_1242 2% 6% 0.345 0.6812.5 2.57 12 23 12178%1
3LW5_CLA_2_2011 2% 5% 0.31 0.7112.08 3.13 7 19 1138%1
3LW5_CLA_1_1013 2% 3% 0.419 0.7472.77 3.31 20 22 18278%1
3LW5_CLA_F_1305 2% 5% 0.361 0.6752.67 2.64 21 23 17482%1
3LW5_CLA_2_2003 2% 5% 0.379 0.7692.1 3.08 8 18 1138%1
3LW5_CLA_1_1310 2% 4% 0.314 0.6892.2 3.37 8 19 0138%1
3LW5_CLA_B_1213 2% 5% 0.373 0.6882.54 2.65 12 18 25171%1
3LW5_CLA_A_1112 1% 6% 0.408 0.6932.62 2.46 13 18 32169%1
3LW5_CLA_B_1233 1% 6% 0.395 0.662.53 2.64 12 18 7178%1
3LW5_CLA_H_1505 1% 6% 0.394 0.6422.4 2.54 12 19 6285%1
3LW5_CLA_4_4004 1% 5% 0.356 0.6812.15 3.17 8 19 2138%1
3LW5_CLA_B_1232 1% 5% 0.419 0.6882.65 2.63 12 1718169%1
3LW5_CLA_3_1118 1% 3% 0.327 0.6182.79 3.51 12 160155%1
3LW5_CLA_4_4001 1% 6% 0.43 0.6812.54 2.54 13 19 5177%1
3LW5_CLA_3_3005 1% 5% 0.279 0.592.06 3.12 8 18 9138%1
3LW5_CLA_3_3012 1% 5% 0.279 0.57 2.21 3.18 9 19 11138%1
3LW5_CLA_3_3015 1% 6% 0.421 0.7162.09 2.99 8 170138%1
3LW5_CLA_3_3016 1% 9% 0.469 0.6382.2 2.27 14 19 282100%1
3LW5_CLA_1_1006 1% 3% 0.425 0.6292.9 3.3 12 1715155%1
3LW5_CLA_L_1504 1% 7% 0.421 0.571 2.41 2.47 13 23 22285%1
3LW5_CLA_2_1307 1% 5% 0.501 0.7242.24 3.1 9 19 0138%1
3LW5_CLA_A_1309 0% 6% 0.561 0.5772.09 2.98 9 160138%1
3LW5_CLA_3_3014 0% 4% 0.524 0.531 2.24 3.29 9 20 0138%1
2O01_CLA_B_1209 94% 7% 0.056 0.9812.21 2.52 10 21 46285%1
4XK8_CLA_b_803 92% 8% 0.072 0.9632.07 2.52 16 26 01100%1
5L8R_CLA_A_839 92% 25% 0.078 0.9691.32 1.73 6 1171100%1
4Y28_CLA_B_1235 84% 6% 0.094 0.9552.36 2.64 19 22 91100%1
4RKU_CLA_B_9010 78% 7% 0.103 0.9452.2 2.61 16 25 281100%1
1VF5_CLA_B_201 100% 10% 0.039 0.9931.92 2.34 10 1793100%1
7M78_CLA_B_840 100% 32% 0.041 0.9911.37 1.33 4 821100%1
5GTI_CLA_a_405 100% 7% 0.036 0.9822.11 2.77 15 30 01100%1
5V2C_CLA_B_604 99% 14% 0.049 0.9861.64 2.25 13 20 01100%1
2D2C_CLA_O_1201 99% 10% 0.057 0.9912.34 1.98 19 1594100%1