Ligand validation:3O4O


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3O4O designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3O4O_NAG_C_338Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3O4O_NAG_C_338Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3O4O_NAG_C_338 32% 56% 0.151 0.8210.5 1.18 - 100100%0.9333
3O4O_NAG_B_340 22% 48% 0.207 0.820.55 1.43 - 200100%0.9333
3O4O_NAG_C_337 17% 54% 0.186 0.7630.58 1.18 - 300100%0.9333
3O4O_NAG_B_337 4% 65% 0.264 0.6380.53 0.82 - -00100%0.9333
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%0.9333
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%0.9333
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%0.9333
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%0.9333
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%0.9333