UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 4DPD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4DPD_UMP_A_703 | 85% | 19% | 0.083 | 0.955 | 1.34 | 1.96 | 4 | 9 | 1 | 0 | 100% | 1 |
| 4DPD_UMP_B_701 | 82% | 19% | 0.093 | 0.953 | 1.35 | 1.96 | 2 | 9 | 0 | 0 | 100% | 1 |
| 6A2O_UMP_A_703 | 100% | 17% | 0.022 | 0.996 | 1.63 | 1.89 | 5 | 7 | 0 | 0 | 100% | 1 |
| 7F3Y_UMP_A_703 | 100% | 58% | 0.034 | 0.992 | 0.54 | 0.9 | - | 1 | 5 | 0 | 100% | 1 |
| 1J3K_UMP_D_711 | 97% | 19% | 0.051 | 0.976 | 1.65 | 1.73 | 4 | 9 | 0 | 0 | 100% | 1 |
| 6A2M_UMP_B_703 | 97% | 25% | 0.052 | 0.977 | 1.31 | 1.61 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6LHJ_UMP_A_703 | 97% | 62% | 0.054 | 0.975 | 0.56 | 0.73 | - | - | 0 | 0 | 100% | 1 |
| 4XSD_UMP_B_1001 | 100% | 5% | 0.018 | 0.998 | 3.69 | 1.69 | 9 | 6 | 4 | 0 | 100% | 1 |
| 2WE2_UMP_A_1258 | 100% | 42% | 0.019 | 0.996 | 0.83 | 1.3 | - | 4 | 0 | 0 | 100% | 1 |
| 5IFY_UMP_A_501 | 100% | 75% | 0.023 | 0.995 | 0.47 | 0.41 | - | - | 0 | 0 | 100% | 1 |
| 3QJ7_UMP_A_600 | 100% | 28% | 0.024 | 0.995 | 0.87 | 1.89 | - | 6 | 1 | 0 | 100% | 1 |
| 4EIL_UMP_B_701 | 100% | 2% | 0.025 | 0.995 | 1.26 | 5.29 | 4 | 15 | 7 | 0 | 100% | 1 |
