Ligand validation:4EDF

UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE

UPG is a Ligand Of Interest in 4EDF designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4EDF_UPG_B_501	85%	41%	0.101	0.968	0.9	1.37	2	5	0	0	100%	1
4EDF_UPG_A_501	82%	40%	0.117	0.972	0.98	1.34	2	6	0	0	100%	1
4EDF_UPG_C_501	81%	42%	0.118	0.971	0.94	1.29	2	5	0	0	100%	1
4EDF_UPG_D_501	78%	43%	0.124	0.968	0.92	1.28	2	5	0	0	100%	1
2Q3E_UPG_C_501	99%	41%	0.057	0.987	0.93	1.37	-	6	2	0	100%	1
3KHU_UPG_E_502	86%	33%	0.096	0.964	1.15	1.5	4	9	0	0	100%	1
6C5A_UPG_F_502	79%	34%	0.133	0.98	1.19	1.4	3	6	2	0	100%	1
6C4J_UPG_A_502	77%	34%	0.142	0.981	1.22	1.37	2	5	1	0	100%	1
6C5Z_UPG_F_501	73%	44%	0.147	0.976	0.89	1.26	1	4	2	0	100%	1
3JSZ_UPG_A_526	100%	39%	0.042	0.983	0.94	1.41	1	5	0	0	100%	1
6K0I_UPG_A_402	98%	27%	0.057	0.98	1.31	1.63	5	11	2	0	100%	1
1I24_UPG_A_402	98%	49%	0.061	0.982	0.87	1.11	1	4	1	0	100%	0.9833
1EK6_UPG_A_401	98%	48%	0.061	0.982	0.89	1.12	-	3	1	0	100%	1
7VZ6_UPG_A_501	97%	67%	0.071	0.987	0.52	0.73	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.