GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4ITR designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4ITR_GDP_C_202 | 98% | 44% | 0.053 | 0.981 | 1 | 1.06 | 2 | 2 | 0 | 0 | 100% | 1 |
| 4ITR_GDP_D_202 | 97% | 44% | 0.054 | 0.975 | 1.02 | 1.03 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5C2J_GDP_B_501 | 88% | 29% | 0.099 | 0.981 | 1.29 | 1.45 | 2 | 6 | 2 | 0 | 100% | 1 |
| 1A4R_GDP_A_200 | 80% | 9% | 0.123 | 0.978 | 2.33 | 2.07 | 6 | 7 | 0 | 0 | 100% | 1 |
| 4DID_GDP_A_200 | 75% | 44% | 0.139 | 0.979 | 0.97 | 1.09 | 2 | 3 | 1 | 0 | 100% | 1 |
| 6SIU_GDP_C_201 | 75% | 41% | 0.14 | 0.979 | 0.99 | 1.2 | 1 | 3 | 2 | 0 | 100% | 1 |
| 7S0Y_GDP_B_201 | 72% | 44% | 0.152 | 0.983 | 0.87 | 1.18 | - | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
