2TM: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine
2TM is a Ligand Of Interest in 4OIO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4OIO_2TM_D_2006 | 57% | 26% | 0.093 | 0.866 | 1.71 | 1.21 | 7 | 3 | 1 | 0 | 100% | 1 |
| 5X22_2TM_N_2007 | 54% | 23% | 0.133 | 0.898 | 1.87 | 1.24 | 10 | 4 | 0 | 0 | 100% | 0.5 |
| 7EH1_2TM_I_2101 | 41% | 3% | 0.134 | 0.846 | 5.05 | 1.22 | 17 | 2 | 0 | 0 | 100% | 0.82 |
| 8W8P_2TM_D_1606 | 29% | 5% | 0.151 | 0.808 | 4.03 | 1.17 | 15 | 3 | 6 | 0 | 100% | 0.82 |
| 4Q4Z_2TM_D_2006 | 27% | 12% | 0.112 | 0.757 | 2.18 | 1.78 | 8 | 10 | 3 | 0 | 100% | 1 |
| 7EH0_2TM_D_2006 | 3% | 7% | 0.188 | 0.538 | 3.71 | 1.09 | 15 | 2 | 3 | 0 | 100% | 0.82 |
| 6P1W_2TM_A_501 | 99% | 47% | 0.037 | 0.989 | 0.87 | 1.06 | - | 2 | 0 | 0 | 100% | 1 |
| 6YWN_2TM_A_702 | 99% | 21% | 0.041 | 0.989 | 1.78 | 1.43 | 9 | 5 | 0 | 0 | 100% | 1 |
| 6P1T_2TM_A_501 | 98% | 44% | 0.053 | 0.982 | 0.88 | 1.19 | 1 | 3 | 2 | 0 | 100% | 0.99 |
| 6JUS_2TM_F_401 | 96% | 22% | 0.059 | 0.977 | 1.57 | 1.56 | 3 | 10 | 2 | 0 | 100% | 1 |
| 6JUQ_2TM_F_401 | 93% | 37% | 0.051 | 0.951 | 1.37 | 1.01 | 3 | 1 | 7 | 0 | 100% | 1 |
