DU: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DU is a Ligand Of Interest in 4P9C designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4P9C_DU_B_203 | 85% | 3% | 0.076 | 0.945 | 3.52 | 2.63 | 15 | 14 | 1 | 0 | 100% | 1 |
| 4P9C_DU_H_203 | 80% | 4% | 0.086 | 0.94 | 3.03 | 2.65 | 13 | 11 | 0 | 0 | 100% | 1 |
| 4P9C_DU_G_203 | 73% | 4% | 0.098 | 0.926 | 3.29 | 2.48 | 12 | 13 | 3 | 0 | 100% | 1 |
| 4P9C_DU_J_203 | 70% | 3% | 0.1 | 0.918 | 3.23 | 2.56 | 13 | 12 | 5 | 0 | 100% | 1 |
| 4P9C_DU_K_203 | 69% | 4% | 0.098 | 0.914 | 3.29 | 2.28 | 13 | 13 | 0 | 0 | 100% | 1 |
| 4P9C_DU_E_203 | 66% | 24% | 0.107 | 0.914 | 1.16 | 1.83 | 3 | 7 | 3 | 0 | 100% | 1 |
| 4P9C_DU_I_203 | 62% | 6% | 0.107 | 0.898 | 2.8 | 2.16 | 12 | 12 | 3 | 0 | 100% | 1 |
| 4P9C_DU_C_203 | 61% | 24% | 0.119 | 0.908 | 1.16 | 1.83 | 2 | 7 | 7 | 0 | 100% | 1 |
| 4P9C_DU_L_203 | 60% | 4% | 0.109 | 0.893 | 3.24 | 2.54 | 14 | 12 | 3 | 0 | 100% | 1 |
| 4P9C_DU_A_203 | 49% | 24% | 0.132 | 0.877 | 1.16 | 1.84 | 3 | 7 | 4 | 0 | 100% | 1 |
| 4P9C_DU_D_203 | 49% | 3% | 0.124 | 0.868 | 3.91 | 2.03 | 12 | 7 | 2 | 0 | 100% | 1 |
| 4P9C_DU_F_203 | 41% | 24% | 0.144 | 0.858 | 1.16 | 1.85 | 3 | 7 | 7 | 0 | 100% | 1 |
| 9HDT_DU_A_501 | 100% | 32% | 0.031 | 0.993 | 1 | 1.57 | 1 | 6 | 0 | 0 | 100% | 1 |
| 4KAS_DU_A_301 | 97% | 26% | 0.052 | 0.974 | 1.44 | 1.44 | 3 | 4 | 1 | 0 | 100% | 1 |
| 4KAT_DU_B_301 | 91% | 26% | 0.063 | 0.957 | 1.22 | 1.68 | 3 | 6 | 0 | 0 | 100% | 1 |
| 8Y1Q_DU_A_201 | 83% | 68% | 0.066 | 0.927 | 0.53 | 0.56 | - | 1 | 0 | 0 | 100% | 1 |
| 6AJP_DU_A_301 | 60% | 3% | 0.12 | 0.905 | 4.38 | 1.72 | 14 | 5 | 7 | 0 | 100% | 1 |