DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 4RKU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4RKU_DGD_B_7101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4RKU_DGD_B_7101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4RKU_DGD_B_7101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4RKU_DGD_B_7101 41% 42% 0.149 0.8790.88 1.36 1 104092%1
5L8R_DGD_J_1106 66% 49% 0.107 0.9340.92 1.06 4 59088%1
4XK8_DGD_B_850 59% 54% 0.123 0.9050.86 0.93 2 400100%1
4Y28_DGD_B_7101 50% 42% 0.148 0.910.91 1.33 1 114092%1
6ZXS_DGD_2_327 22% 48% 0.199 0.8540.92 1.09 3 55077%1
7DKZ_DGD_B_850 16% 33% 0.252 0.8251.13 1.5 6 1080100%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1
7YQ7_DGD_C_518 87% 51% 0.084 0.9670.83 1.07 3 50094%1