4YDJ
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4YDJ designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4YDJ_NAG_I_505 | 50% | 87% | 0.156 | 0.906 | 0.23 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_503 | 45% | 88% | 0.158 | 0.887 | 0.23 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_508 | 41% | 90% | 0.172 | 0.888 | 0.22 | 0.38 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_505 | 41% | 83% | 0.144 | 0.858 | 0.28 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_501 | 28% | 88% | 0.215 | 0.867 | 0.2 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_503 | 22% | 89% | 0.243 | 0.861 | 0.23 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_506 | 19% | 86% | 0.21 | 0.804 | 0.25 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_501 | 13% | 87% | 0.27 | 0.813 | 0.21 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_508 | 13% | 86% | 0.273 | 0.814 | 0.26 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_504 | 13% | 87% | 0.341 | 0.881 | 0.28 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_H_301 | 11% | 85% | 0.361 | 0.887 | 0.24 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_504 | 11% | 88% | 0.277 | 0.795 | 0.25 | 0.42 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_507 | 8% | 86% | 0.329 | 0.812 | 0.2 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_509 | 7% | 86% | 0.364 | 0.817 | 0.26 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_A_301 | 6% | 86% | 0.342 | 0.767 | 0.19 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_507 | 5% | 85% | 0.4 | 0.815 | 0.21 | 0.53 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_509 | 5% | 83% | 0.32 | 0.729 | 0.25 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_B_301 | 5% | 88% | 0.349 | 0.747 | 0.27 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_502 | 3% | 88% | 0.511 | 0.859 | 0.24 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_I_506 | 3% | 88% | 0.415 | 0.75 | 0.25 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_L_301 | 2% | 87% | 0.483 | 0.741 | 0.23 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
4YDJ_NAG_G_502 | 0% | 68% | 0.69 | 0.698 | 0.51 | 0.7 | - | 1 | 1 | 0 | 100% | 0.9333 |
3SE8_NAG_G_734 | 94% | 68% | 0.063 | 0.961 | 0.56 | 0.68 | - | - | 0 | 0 | 100% | 0.9333 |
7SX7_NAG_A_508 | 92% | 71% | 0.073 | 0.964 | 0.28 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
4DVW_NAG_A_503 | 91% | 65% | 0.087 | 0.973 | 0.51 | 0.81 | - | - | 1 | 0 | 100% | 0.9333 |
4OLX_NAG_G_502 | 90% | 76% | 0.095 | 0.976 | 0.34 | 0.59 | - | - | 0 | 0 | 100% | 0.9333 |
4H8W_NAG_G_509 | 89% | 18% | 0.07 | 0.949 | 1.02 | 2.45 | 2 | 6 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |