Ligand validation:4YDK

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YDK_GOL_H_303	75%	87%	0.121	0.96	0.35	0.28	-	-	0	0	100%	1
4YDK_GOL_L_303	63%	90%	0.137	0.934	0.38	0.18	-	-	0	0	100%	1
4YDK_GOL_L_306	56%	92%	0.149	0.923	0.38	0.11	-	-	0	0	100%	1
4YDK_GOL_L_305	56%	90%	0.156	0.93	0.37	0.19	-	-	0	0	100%	1
4YDK_GOL_G_517	51%	88%	0.161	0.917	0.36	0.26	-	-	0	0	100%	1
4YDK_GOL_L_307	49%	90%	0.216	0.97	0.38	0.18	-	-	0	0	100%	1
4YDK_GOL_G_519	49%	90%	0.146	0.892	0.37	0.18	-	-	0	0	100%	1
4YDK_GOL_H_302	32%	89%	0.194	0.871	0.38	0.2	-	-	0	0	100%	1
4YDK_GOL_H_304	26%	89%	0.255	0.908	0.37	0.21	-	-	0	0	100%	1
4YDK_GOL_L_304	13%	88%	0.207	0.76	0.36	0.24	-	-	0	0	100%	1
4YDK_GOL_G_515	9%	87%	0.251	0.754	0.38	0.27	-	-	1	0	100%	1
4YDK_GOL_G_518	5%	89%	0.242	0.664	0.36	0.23	-	-	0	0	100%	1
4YDK_GOL_G_520	3%	87%	0.261	0.614	0.37	0.26	-	-	0	0	100%	1
5MR6_GOL_B_602	100%	63%	0.013	0.999	0.38	0.88	-	-	0	0	100%	1
23OM_GOL_A_303	100%	52%	0.017	0.997	0.7	1.01	-	-	0	0	100%	1
2NT0_GOL_D_506	100%	69%	0.016	0.997	0.3	0.72	-	-	0	0	100%	1
9O0J_GOL_G_302	100%	76%	0.015	0.997	0.4	0.46	-	-	0	0	100%	1
2YOQ_GOL_B_1196	100%	68%	0.019	0.996	0.68	0.42	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.