4YDL | pdb_00004ydl


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YDL designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YDL_NAG_A_503 87% 76% 0.067 0.9450.36 0.49 - -00100%1
4YDL_NAG_G_501 80% 87% 0.098 0.950.28 0.35 - -00100%1
4YDL_NAG_G_503 79% 73% 0.084 0.9330.41 0.5 - -00100%1
4YDL_NAG_A_501 74% 85% 0.113 0.9480.32 0.36 - -00100%1
4YDL_NAG_G_508 74% 77% 0.094 0.9250.35 0.47 - -00100%1
4YDL_NAG_G_505 70% 75% 0.096 0.9130.32 0.54 - -00100%1
4YDL_NAG_A_508 65% 74% 0.11 0.9140.36 0.54 - -00100%1
4YDL_NAG_A_505 64% 71% 0.116 0.9160.37 0.61 - 100100%1
4YDL_NAG_C_301 56% 83% 0.119 0.890.18 0.53 - -00100%1
4YDL_NAG_G_506 55% 75% 0.128 0.8950.27 0.6 - -00100%1
4YDL_NAG_L_301 54% 86% 0.131 0.8940.2 0.45 - -00100%1
4YDL_NAG_A_507 53% 77% 0.144 0.9060.32 0.51 - -00100%1
4YDL_NAG_A_506 51% 74% 0.14 0.8950.37 0.52 - -10100%1
4YDL_NAG_A_504 50% 85% 0.142 0.8920.31 0.36 - -10100%1
4YDL_NAG_G_504 40% 72% 0.148 0.8580.57 0.38 1 -00100%1
4YDL_NAG_G_502 39% 77% 0.162 0.870.36 0.46 - -00100%1
4YDL_NAG_G_509 32% 71% 0.193 0.870.36 0.61 - 110100%1
4YDL_NAG_G_510 22% 72% 0.216 0.8390.28 0.66 - 100100%1
4YDL_NAG_A_509 21% 73% 0.235 0.8550.3 0.62 - 100100%1
4YDL_NAG_G_507 21% 75% 0.235 0.8520.24 0.61 - 100100%1
4YDL_NAG_A_502 6% 69% 0.343 0.8090.58 0.48 - -00100%1
4YDL_NAG_A_510 6% 63% 0.363 0.8130.28 0.96 - 100100%1
5F9W_NAG_A_510 100% 85% 0.023 0.9940.24 0.43 - -00100%1
7SX7_NAG_G_502 99% 58% 0.032 0.9850.67 0.78 - -00100%1
7SX6_NAG_G_504 99% 82% 0.035 0.9870.21 0.52 - -00100%1
4YFL_NAG_E_507 97% 66% 0.061 0.9850.48 0.66 - -00100%1
3SE8_NAG_G_734 92% 64% 0.063 0.9610.56 0.68 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1