PBD: 1-(3,4-dimethoxyphenyl)-3-[3-(1H-imidazol-1-yl)propyl]thiourea
PBD is a Ligand Of Interest in 4YWY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4YWY_PBD_A_402 | 92% | 31% | 0.08 | 0.97 | 1.35 | 1.41 | 3 | 6 | 0 | 0 | 100% | 1 |
| 4YWY_PBD_C_402 | 88% | 40% | 0.087 | 0.963 | 1.19 | 1.13 | 3 | 3 | 0 | 0 | 100% | 1 |
| 4YWY_PBD_B_402 | 83% | 1% | 0.098 | 0.956 | 2.97 | 5.04 | 7 | 13 | 0 | 0 | 100% | 1 |
| 9FXJ_PBD_B_402 | 94% | 69% | 0.07 | 0.967 | 0.41 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 3PBB_PBD_B_381 | 94% | 22% | 0.077 | 0.974 | 1.71 | 1.54 | 4 | 5 | 2 | 0 | 100% | 1 |
| 4FBE_PBD_A_401 | 88% | 31% | 0.089 | 0.964 | 1.3 | 1.44 | 2 | 6 | 0 | 0 | 100% | 1 |
| 4F9V_PBD_A_402 | 83% | 44% | 0.096 | 0.956 | 0.98 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3PB7_PBD_X_390 | 83% | 32% | 0.092 | 0.951 | 1.54 | 1.15 | 5 | 2 | 0 | 0 | 100% | 1 |
