MD1: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER

MD1 is a Ligand Of Interest in 4YDD designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YDD_MD1_E_1004 68% 5% 0.152 0.9633.76 1.76 11 1000100%1
4YDD_MD1_A_1004 64% 3% 0.17 0.9694.09 1.95 10 1320100%1
4YDD_MD1_C_1004 61% 4% 0.174 0.9654.28 1.61 10 1010100%1
5E7O_MD1_E_1004 86% 3% 0.101 0.9714.72 1.73 11 710100%1
5CH7_MD1_E_1004 76% 4% 0.142 0.983.73 1.93 11 1310100%1
5CHC_MD1_E_1004 71% 4% 0.159 0.983.98 1.95 14 1020100%1
2IVF_MD1_A_1987 98% 7% 0.06 0.9832.53 2.41 6 1321100%1
1Y4Z_MD1_A_1800 91% 4% 0.084 0.9713.64 2.08 8 910100%1
1Y5L_MD1_A_1800 91% 3% 0.089 0.9753.6 2.41 9 1020100%1
1Y5I_MD1_A_2800 90% 4% 0.081 0.9633.49 2.34 11 1220100%1
3EGW_MD1_A_1245 86% 3% 0.094 0.9623.58 2.37 9 1010100%1