4YDJ | pdb_00004ydj


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YDJ designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YDJ_NAG_I_505 50% 84% 0.156 0.9060.23 0.47 - -00100%1
4YDJ_NAG_G_503 44% 86% 0.158 0.8870.23 0.43 - -00100%1
4YDJ_NAG_G_505 41% 80% 0.144 0.8580.28 0.49 - -00100%1
4YDJ_NAG_G_508 41% 88% 0.172 0.8880.22 0.38 - -00100%1
4YDJ_NAG_G_501 27% 86% 0.215 0.8670.2 0.45 - -00100%1
4YDJ_NAG_I_503 21% 86% 0.243 0.8610.23 0.41 - -00100%1
4YDJ_NAG_G_506 18% 83% 0.21 0.8040.25 0.46 - -00100%1
4YDJ_NAG_I_501 12% 84% 0.27 0.8130.21 0.48 - -00100%1
4YDJ_NAG_I_508 12% 83% 0.273 0.8140.26 0.46 - -00100%1
4YDJ_NAG_I_504 11% 85% 0.341 0.8810.28 0.4 - -00100%1
4YDJ_NAG_H_301 10% 82% 0.361 0.8870.24 0.49 - -00100%1
4YDJ_NAG_G_504 10% 85% 0.277 0.7950.25 0.42 - -00100%1
4YDJ_NAG_G_507 7% 83% 0.329 0.8120.2 0.52 - -00100%1
4YDJ_NAG_I_509 6% 83% 0.364 0.8170.26 0.46 - -00100%1
4YDJ_NAG_A_301 5% 84% 0.342 0.7670.19 0.51 - -00100%1
4YDJ_NAG_G_509 4% 80% 0.32 0.7290.25 0.52 - -00100%1
4YDJ_NAG_I_507 4% 82% 0.4 0.8150.21 0.53 - -00100%1
4YDJ_NAG_B_301 4% 85% 0.349 0.7470.27 0.4 - -00100%1
4YDJ_NAG_I_502 2% 86% 0.511 0.8590.24 0.41 - -00100%1
4YDJ_NAG_I_506 2% 86% 0.415 0.750.25 0.41 - -00100%1
4YDJ_NAG_L_301 1% 84% 0.483 0.7410.23 0.47 - -00100%1
4YDJ_NAG_G_502 0% 64% 0.69 0.6980.51 0.7 - 110100%1
5F9W_NAG_A_510 100% 85% 0.023 0.9940.24 0.43 - -00100%1
7SX7_NAG_G_502 100% 58% 0.032 0.9850.67 0.78 - -00100%1
7SX6_NAG_G_504 99% 82% 0.035 0.9870.21 0.52 - -00100%1
4YFL_NAG_E_507 97% 66% 0.061 0.9850.48 0.66 - -00100%1
3SE8_NAG_G_734 92% 64% 0.063 0.9610.56 0.68 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1