NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4YDK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4YDK_NAG_G_503 | 58% | 85% | 0.106 | 0.884 | 0.24 | 0.5 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_508 | 38% | 86% | 0.22 | 0.923 | 0.26 | 0.45 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_504 | 35% | 85% | 0.213 | 0.902 | 0.26 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
4YDK_NAG_G_505 | 31% | 83% | 0.174 | 0.841 | 0.28 | 0.49 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_506 | 29% | 87% | 0.198 | 0.854 | 0.25 | 0.44 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_501 | 22% | 91% | 0.242 | 0.857 | 0.25 | 0.33 | - | - | 0 | 0 | 100% | 0.9333 |
4YDK_NAG_G_507 | 10% | 88% | 0.3 | 0.808 | 0.21 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
4YDK_NAG_G_509 | 4% | 89% | 0.434 | 0.823 | 0.23 | 0.41 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_510 | 1% | 91% | 0.524 | 0.642 | 0.2 | 0.36 | - | - | 1 | 0 | 100% | 0.9333 |
4YDK_NAG_G_502 | 0% | 89% | 0.636 | 0.635 | 0.27 | 0.38 | - | - | 0 | 0 | 100% | 0.9333 |
4YFL_NAG_E_507 | 98% | 70% | 0.061 | 0.985 | 0.48 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3SE8_NAG_G_734 | 94% | 68% | 0.063 | 0.961 | 0.56 | 0.68 | - | - | 0 | 0 | 100% | 0.9333 |
4LSQ_NAG_G_503 | 93% | 57% | 0.065 | 0.96 | 0.58 | 1.07 | - | 1 | 0 | 0 | 100% | 0.9333 |
7SX7_NAG_A_508 | 92% | 71% | 0.073 | 0.964 | 0.28 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
4DVW_NAG_A_503 | 91% | 65% | 0.087 | 0.973 | 0.51 | 0.81 | - | - | 1 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |