4YDK | pdb_00004ydk


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YDK designated by the RCSB
Help


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4YDK_NAG_G_503 58% 82% 0.106 0.8840.24 0.5 - -10100%1
4YDK_NAG_G_508 37% 83% 0.22 0.9230.26 0.45 - -10100%1
4YDK_NAG_G_504 34% 82% 0.213 0.9020.26 0.48 - -00100%1
4YDK_NAG_G_505 30% 80% 0.174 0.8410.28 0.49 - -10100%1
4YDK_NAG_G_506 28% 84% 0.198 0.8540.25 0.44 - -10100%1
4YDK_NAG_G_501 20% 89% 0.242 0.8570.25 0.33 - -00100%1
4YDK_NAG_G_507 9% 86% 0.3 0.8080.21 0.45 - -00100%1
4YDK_NAG_G_509 3% 86% 0.434 0.8230.23 0.41 - -10100%1
4YDK_NAG_G_510 1% 89% 0.524 0.6420.2 0.36 - -10100%1
4YDK_NAG_G_502 0% 86% 0.636 0.6350.27 0.38 - -00100%1
5F9W_NAG_A_510 100% 85% 0.023 0.9940.24 0.43 - -00100%1
7SX7_NAG_A_508 100% 46% 0.032 0.9850.77 1.21 - 100100%1
7SX6_NAG_G_504 99% 82% 0.035 0.9870.21 0.52 - -00100%1
4YFL_NAG_E_507 97% 66% 0.061 0.9850.48 0.66 - -00100%1
3SE8_NAG_G_734 92% 64% 0.063 0.9610.56 0.68 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1