NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5AFN designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5AFN_NAG_A_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5AFN_NAG_A_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5AFN_NAG_A_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5AFN_NAG_A_301 62% 38% 0.09 0.8910.62 1.76 - 41093%1
5AFN_NAG_E_301 61% 35% 0.086 0.8840.87 1.67 1 42093%1
5AFN_NAG_C_301 55% 49% 0.101 0.880.58 1.37 - 34093%1
5AFN_NAG_D_301 53% 37% 0.1 0.870.65 1.77 - 33093%1
5AFN_NAG_B_301 49% 55% 0.099 0.8540.64 1.09 - 23093%1
5AFN_NAG_A_302 39% 30% 0.126 0.8430.73 2.02 - 20093%1
5AFN_NAG_B_302 25% 66% 0.106 0.7520.46 0.85 - -1093%1
5AFN_NAG_C_302 13% 63% 0.127 0.6730.47 0.94 - 11093%1
5AFN_NAG_E_302 9% 45% 0.141 0.6410.49 1.61 - 22093%1
5AFN_NAG_D_302 9% 64% 0.126 0.6230.42 0.93 - 11093%1
5AFM_NAG_A_301 75% 24% 0.064 0.9091.35 1.73 3 54093%1
5AFJ_NAG_A_301 58% 47% 0.091 0.8790.56 1.45 - 23093%1
4HQP_NAG_C_801 20% 67% 0.09 0.690.51 0.75 - 100100%1
3SQ9_NAG_C_901 15% 61% 0.11 0.6710.98 0.54 1 -30100%1
3SQ6_NAG_H_901 14% 53% 0.142 0.6850.95 0.86 1 120100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1