Ligand validation:5H2K


DD9: nonane



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5H2K_DD9_A_611Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5H2K_DD9_A_611Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5H2K_DD9_A_611Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5H2K_DD9_A_611 10% 72% 0.161 0.6610.3 0.76 - -00100%1
5B35_DD9_A_313 9% 82% 0.266 0.750.35 0.44 - -00100%1
5H2P_DD9_A_313 8% 72% 0.165 0.6430.3 0.76 - -00100%1
5H2M_DD9_A_611 7% 72% 0.171 0.6290.3 0.76 - -00100%1
5H2O_DD9_A_611 6% 72% 0.189 0.630.3 0.76 - -00100%1
5B34_DD9_A_314 6% 77% 0.341 0.7810.32 0.59 - -00100%1
6S63_DD9_A_309 59% 99% 0.099 0.9010.12 0.08 - -0089%0.8889
6GUZ_DD9_A_303 9% 99% 0.187 0.6820.13 0.11 - -00100%1