SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5KAF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 5KAF_SQD_B_626 | 28% | 33% | 0.148 | 0.799 | 0.95 | 1.6 | 3 | 12 | 9 | 0 | 100% | 1 |
| 5KAF_SQD_A_603 | 27% | 34% | 0.174 | 0.83 | 0.97 | 1.53 | 3 | 11 | 2 | 0 | 96% | 1 |
| 5KAF_SQD_b_601 | 25% | 37% | 0.159 | 0.798 | 0.96 | 1.39 | 3 | 9 | 1 | 0 | 100% | 1 |
| 5KAF_SQD_f_101 | 21% | 31% | 0.17 | 0.822 | 1.07 | 1.58 | 3 | 11 | 0 | 0 | 80% | 1 |
| 5KAF_SQD_c_501 | 20% | 36% | 0.191 | 0.799 | 0.95 | 1.45 | 3 | 9 | 2 | 0 | 100% | 1 |
| 5KAF_SQD_D_408 | 20% | 29% | 0.164 | 0.791 | 1.01 | 1.72 | 2 | 11 | 1 | 0 | 87% | 1 |
| 5KAF_SQD_D_409 | 12% | 31% | 0.188 | 0.767 | 1.07 | 1.56 | 3 | 10 | 0 | 0 | 80% | 1 |
| 5KAF_SQD_I_101 | 12% | 44% | 0.178 | 0.764 | 0.87 | 1.2 | 2 | 2 | 0 | 0 | 74% | 1 |
| 5KAF_SQD_A_619 | 10% | 44% | 0.202 | 0.766 | 0.89 | 1.18 | 2 | 2 | 3 | 0 | 74% | 1 |
| 5V2C_SQD_A_612 | 95% | 22% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 89% | 28% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_B_636 | 88% | 41% | 0.084 | 0.966 | 1.01 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 88% | 28% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 86% | 28% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 85% | 30% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |