Ligand validation:5KGD

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KGD_EDO_A_403	82%	73%	0.085	0.944	0.55	0.38	-	-	0	0	100%	1
5KGD_EDO_A_407	61%	79%	0.107	0.896	0.52	0.29	-	-	0	0	100%	1
5KGD_EDO_A_406	59%	74%	0.111	0.894	0.5	0.41	-	-	0	0	100%	1
5KGD_EDO_A_416	56%	82%	0.127	0.898	0.49	0.27	-	-	1	0	100%	1
5KGD_EDO_A_414	39%	74%	0.18	0.89	0.5	0.39	-	-	0	0	100%	1
5KGD_EDO_A_409	39%	86%	0.181	0.891	0.56	0.12	-	-	0	0	100%	1
5KGD_EDO_A_402	36%	70%	0.18	0.876	0.39	0.6	-	-	2	0	100%	1
5KGD_EDO_A_411	35%	76%	0.16	0.849	0.5	0.35	-	-	0	0	100%	1
5KGD_EDO_A_415	30%	76%	0.139	0.8	0.52	0.34	-	-	0	0	100%	1
5KGD_EDO_A_417	30%	79%	0.178	0.842	0.53	0.27	-	-	1	0	100%	1
5KGD_EDO_A_404	26%	68%	0.25	0.903	0.39	0.67	-	-	0	0	100%	1
5KGD_EDO_A_419	23%	83%	0.141	0.764	0.55	0.18	-	-	0	0	100%	1
5KGD_EDO_A_408	22%	73%	0.187	0.811	0.47	0.45	-	-	0	0	100%	1
5KGD_EDO_A_401	22%	72%	0.208	0.831	0.38	0.57	-	-	0	0	100%	1
5KGD_EDO_A_405	16%	74%	0.25	0.832	0.66	0.25	-	-	0	0	100%	1
5KGD_EDO_A_418	13%	71%	0.275	0.835	0.41	0.55	-	-	3	0	100%	1
5KGD_EDO_A_412	13%	76%	0.262	0.813	0.47	0.39	-	-	0	0	100%	1
5KGD_EDO_A_410	12%	73%	0.162	0.699	0.51	0.42	-	-	0	0	100%	1
5KGD_EDO_A_413	10%	68%	0.219	0.732	0.4	0.67	-	-	0	0	100%	1
6BSK_EDO_A_402	98%	77%	0.056	0.987	0.58	0.26	-	-	0	0	100%	1
2OI4_EDO_X_1002	94%	78%	0.067	0.976	0.48	0.34	-	-	4	0	100%	1
4GW8_EDO_A_402	89%	71%	0.059	0.944	0.34	0.62	-	-	0	0	100%	1
7OOV_EDO_A_404	88%	98%	0.087	0.97	0.14	0.11	-	-	0	0	100%	1
8R0W_EDO_A_401	85%	90%	0.084	0.953	0.39	0.15	-	-	1	0	100%	1
4Q6J_EDO_A_302	100%	79%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5BV2_EDO_P_811	100%	81%	0.013	0.998	0.34	0.41	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	83%	0.012	0.998	0.49	0.24	-	-	0	0	100%	1
3QNB_EDO_B_1	100%	64%	0.016	0.998	0.45	0.76	-	-	2	0	100%	1
3UXJ_EDO_B_291	100%	65%	0.017	0.998	0.66	0.55	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.