GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5MLB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5MLB_GDP_C_201 | 70% | 35% | 0.163 | 0.986 | 1.18 | 1.27 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5MLB_GDP_G_201 | 62% | 35% | 0.159 | 0.955 | 1.01 | 1.43 | 1 | 3 | 1 | 0 | 100% | 1 |
| 5MLB_GDP_A_201 | 60% | 38% | 0.191 | 0.982 | 0.88 | 1.43 | - | 6 | 1 | 0 | 100% | 1 |
| 5MLB_GDP_E_201 | 57% | 38% | 0.196 | 0.976 | 0.99 | 1.32 | 1 | 5 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
| 9C43_GDP_B_201 | 100% | 51% | 0.016 | 0.997 | 1.08 | 0.72 | 2 | - | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3Z_GDP_A_202 | 100% | 34% | 0.016 | 0.998 | 1.18 | 1.33 | 2 | 3 | 0 | 0 | 100% | 1 |
