Ligand validation:5MMS

PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 5MMS designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5MMS_PLP_D_1002	79%	54%	0.131	0.977	0.91	0.85	1	-	0	0	100%	0.9375
5MMS_PLP_C_1002	70%	54%	0.153	0.972	0.94	0.85	1	-	0	0	100%	0.9375
5MMS_PLP_B_1002	70%	55%	0.162	0.98	0.87	0.87	1	-	0	0	100%	0.9375
5MMS_PLP_F_503	67%	53%	0.154	0.963	1.03	0.78	-	-	0	0	100%	0.9375
5MMS_PLP_E_503	59%	54%	0.183	0.967	0.92	0.87	2	-	0	0	100%	0.9375
5MMS_PLP_A_1002	58%	55%	0.186	0.968	0.98	0.76	1	-	0	0	100%	0.9375
8STW_PLP_E_501	88%	59%	0.107	0.985	0.79	0.75	1	1	0	0	100%	0.9375
1M54_PLP_F_1610	84%	38%	0.117	0.981	1.37	1.14	4	1	4	0	100%	0.9375
1JBQ_PLP_A_1001	73%	39%	0.137	0.965	1.29	1.16	2	1	1	0	100%	0.9375
2BIE_PLP_B_1361	100%	32%	0.039	0.989	1.43	1.39	4	3	1	0	100%	0.9375
4NOG_PLP_A_501	100%	40%	0.042	0.992	1.24	1.18	3	1	0	0	100%	1
3WQC_PLP_B_402	100%	23%	0.045	0.993	1.94	1.38	4	4	0	0	100%	0.9375
4HT3_PLP_B_401	100%	17%	0.045	0.993	2.04	1.72	3	5	0	0	100%	0.9375
1JF9_PLP_A_500	100%	14%	0.047	0.994	1.28	2.78	1	11	0	0	100%	0.9375

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.