SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5MX2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5MX2_SQD_A_409 | 67% | 30% | 0.106 | 0.916 | 1.05 | 1.63 | 3 | 11 | 2 | 0 | 100% | 1 |
| 5MX2_SQD_a_410 | 53% | 36% | 0.123 | 0.885 | 1.05 | 1.34 | 3 | 11 | 3 | 0 | 100% | 1 |
| 5MX2_SQD_b_601 | 45% | 32% | 0.112 | 0.842 | 1.06 | 1.52 | 3 | 13 | 11 | 0 | 100% | 1 |
| 5MX2_SQD_D_412 | 44% | 25% | 0.122 | 0.887 | 1.18 | 1.74 | 3 | 10 | 1 | 0 | 80% | 1 |
| 5MX2_SQD_L_101 | 44% | 8% | 0.11 | 0.854 | 1.15 | 3.33 | 3 | 10 | 5 | 0 | 89% | 1 |
| 5MX2_SQD_a_412 | 42% | 44% | 0.13 | 0.86 | 0.89 | 1.18 | 2 | 6 | 2 | 0 | 93% | 1 |
| 5MX2_SQD_A_411 | 35% | 37% | 0.138 | 0.827 | 1.07 | 1.31 | 3 | 8 | 2 | 0 | 100% | 1 |
| 5MX2_SQD_f_102 | 32% | 27% | 0.156 | 0.869 | 1.19 | 1.63 | 4 | 10 | 3 | 0 | 80% | 1 |
| 5V2C_SQD_A_612 | 95% | 22% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 89% | 28% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_B_636 | 88% | 41% | 0.084 | 0.966 | 1.01 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 88% | 28% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 86% | 28% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 85% | 30% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |
