5NB3 | pdb_00005nb3


PEB: PHYCOERYTHROBILIN

PEB is a Ligand Of Interest in 5NB3 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NB3_PEB_A_166 98% 13% 0.041 0.9752.08 1.81 12 1400100%1
5NB3_PEB_F_166 98% 9% 0.042 0.9742.3 2.1 12 24 00100%1
5NB3_PEB_H_166 98% 10% 0.044 0.9762.16 2.1 10 1650100%1
5NB3_PEB_G_166 98% 11% 0.043 0.9742.13 2.01 9 1550100%1
5NB3_PEB_P_188 98% 12% 0.044 0.9742.13 1.81 9 1790100%1
5NB3_PEB_L_166 98% 7% 0.044 0.9722.49 2.16 12 1650100%1
5NB3_PEB_W_186 98% 7% 0.047 0.9752.34 2.29 11 23 20100%1
5NB3_PEB_V_188 97% 10% 0.046 0.9732.31 1.92 13 1650100%1
5NB3_PEB_M_187 97% 10% 0.047 0.9712.27 1.99 10 21 40100%1
5NB3_PEB_G_167 97% 9% 0.047 0.9712.5 1.83 10 1550100%1
5NB3_PEB_C_166 97% 8% 0.046 0.9692.3 2.3 9 22 60100%1
5NB3_PEB_J_166 97% 9% 0.047 0.972.24 2.11 11 18 30100%1
5NB3_PEB_D_166 97% 9% 0.047 0.9692.21 2.11 12 1530100%1
5NB3_PEB_M_186 97% 7% 0.05 0.9722.63 2.14 13 19 30100%1
5NB3_PEB_P_186 97% 8% 0.052 0.9742.34 2.18 10 18 50100%1
5NB3_PEB_F_167 97% 9% 0.049 0.972.53 1.93 12 1550100%1
5NB3_PEB_B_166 97% 8% 0.048 0.9682.6 2.04 10 1730100%1
5NB3_PEB_O_188 97% 10% 0.048 0.9682.36 1.92 11 17100100%1
5NB3_PEB_K_166 97% 9% 0.048 0.9682.32 2.1 10 20 50100%1
5NB3_PEB_W_188 97% 10% 0.049 0.9692.37 1.86 11 1570100%1
5NB3_PEB_E_166 96% 7% 0.05 0.9692.62 2.16 13 1660100%1
5NB3_PEB_A_167 96% 9% 0.051 0.972.21 2.19 12 21 30100%1
5NB3_PEB_N_186 96% 7% 0.052 0.9712.6 2.19 14 22 50100%1
5NB3_PEB_M_188 96% 10% 0.05 0.9682.37 1.9 13 19 50100%1
5NB3_PEB_U_186 96% 9% 0.053 0.9712.45 1.96 12 1750100%1
5NB3_PEB_W_187 96% 8% 0.052 0.9692.6 2.03 9 19 70100%1
5NB3_PEB_V_187 96% 12% 0.051 0.9672.39 1.63 9 1200100%1
5NB3_PEB_Q_188 96% 8% 0.05 0.9652.44 2.12 15 1770100%1
5NB3_PEB_V_186 96% 8% 0.053 0.9682.57 1.93 13 1230100%1
5NB3_PEB_E_167 96% 9% 0.054 0.9682.56 1.89 11 19 50100%1
5NB3_PEB_O_186 95% 6% 0.054 0.9672.63 2.22 14 18 30100%1
5NB3_PEB_S_188 95% 10% 0.051 0.9632.33 1.9 10 19 40100%1
5NB3_PEB_B_167 95% 6% 0.053 0.9642.5 2.55 11 25 40100%1
5NB3_PEB_X_188 95% 9% 0.053 0.9642.44 1.99 13 18 110100%1
5NB3_PEB_N_187 95% 11% 0.053 0.9632.5 1.65 12 1170100%1
5NB3_PEB_U_187 95% 14% 0.056 0.9662.19 1.61 9 1360100%1
5NB3_PEB_N_188 95% 7% 0.054 0.9632.56 2.15 15 19 40100%1
5NB3_PEB_X_186 95% 8% 0.055 0.9642.46 2.09 11 1440100%1
5NB3_PEB_X_187 94% 10% 0.053 0.9612.47 1.76 12 18 50100%1
5NB3_PEB_Q_186 94% 10% 0.057 0.9652.48 1.82 12 1460100%1
5NB3_PEB_Q_187 94% 11% 0.058 0.9662.37 1.79 10 1670100%1
5NB3_PEB_P_187 94% 10% 0.06 0.9672.27 1.95 11 1730100%1
5NB3_PEB_H_167 94% 8% 0.057 0.9632.51 2.03 10 1650100%1
5NB3_PEB_I_166 94% 7% 0.056 0.962.47 2.3 12 20 50100%1
5NB3_PEB_U_188 94% 9% 0.056 0.962.53 1.8 13 17110100%1
5NB3_PEB_S_187 94% 11% 0.057 0.9612.36 1.81 12 19 50100%1
5NB3_PEB_O_187 94% 9% 0.058 0.9622.4 2.01 12 1740100%1
5NB3_PEB_D_167 93% 8% 0.058 0.962.35 2.25 12 20 50100%1
5NB3_PEB_S_186 93% 10% 0.06 0.9622.41 1.81 11 1530100%1
5NB3_PEB_T_187 92% 9% 0.064 0.962.49 1.94 12 19 50100%1
5NB3_PEB_T_186 91% 8% 0.065 0.9592.44 2.06 14 20 50100%1
5NB3_PEB_K_167 91% 9% 0.063 0.9552.27 2.12 10 22 40100%1
5NB3_PEB_C_167 91% 8% 0.065 0.9562.37 2.09 9 22 30100%1
5NB3_PEB_I_167 90% 9% 0.064 0.9542.39 1.95 12 1560100%1
5NB3_PEB_T_188 90% 8% 0.064 0.9522.46 2.05 14 21 80100%1
5NB3_PEB_R_186 89% 7% 0.068 0.9512.49 2.17 11 20 40100%1
5NB3_PEB_R_187 88% 9% 0.069 0.9512.64 1.82 15 1530100%1
5NB3_PEB_R_188 88% 8% 0.069 0.9482.54 2.02 14 20 70100%1
5NB3_PEB_L_167 88% 6% 0.069 0.9482.55 2.34 11 22 40100%1
5NB3_PEB_J_167 82% 6% 0.078 0.9382.76 2.18 13 1740100%1
5NB4_PEB_V_188 99% 20% 0.042 0.9821.9 1.4 11 710100%1
7AP5_PEB_DDD_203 95% 48% 0.058 0.9690.8 1.09 - 500100%1
5FVB_PEB_L_202 93% 7% 0.059 0.9582.57 2.08 9 19 10100%1
5AQD_PEB_M_188 91% 7% 0.059 0.9532.66 2.09 13 20 10100%1
3V57_PEB_B_205 100% 5% 0.022 0.9932.65 2.46 12 21 00100%1
2BV8_PEB_B_1175 99% 3% 0.038 0.9893.12 2.87 23 20 01100%1
8B4N_PEB_DDD_203 99% 51% 0.039 0.9870.98 0.81 2 140100%1
6OZB_PEB_A_900 96% 7% 0.052 0.9722.97 1.78 17 1540100%1