PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5O5C designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5O5C_PLP_F_601 | 63% | 10% | 0.179 | 0.974 | 2.82 | 1.57 | 4 | 5 | 1 | 0 | 100% | 0.9375 |
5O5C_PLP_A_601 | 61% | 9% | 0.195 | 0.987 | 3.04 | 1.46 | 3 | 4 | 0 | 0 | 100% | 0.9375 |
5O5C_PLP_C_601 | 58% | 11% | 0.197 | 0.977 | 3.07 | 1.18 | 3 | 1 | 1 | 0 | 100% | 0.9375 |
5O5C_PLP_E_601 | 56% | 10% | 0.203 | 0.977 | 2.97 | 1.34 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
5O5C_PLP_B_601 | 47% | 11% | 0.223 | 0.977 | 2.58 | 1.69 | 3 | 4 | 5 | 0 | 94% | 0.9375 |
5O5C_PLP_D_601 | 44% | 12% | 0.214 | 0.956 | 2.53 | 1.62 | 3 | 6 | 4 | 0 | 94% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |