ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 5OPX designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5OPX_ADP_G_600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5OPX_ADP_G_600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5OPX_ADP_G_600Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5OPX_ADP_G_600 56% 25% 0.185 0.9591.15 1.91 2 910100%1
5OPX_ADP_L_600 55% 28% 0.195 0.9651.02 1.86 1 1010100%1
5OPX_ADP_B_600 54% 24% 0.195 0.9621.01 2.06 2 1030100%1
5OPX_ADP_I_600 52% 30% 0.2 0.960.91 1.87 1 820100%1
5OPX_ADP_E_600 52% 30% 0.195 0.9540.85 1.91 - 710100%1
5OPX_ADP_J_600 52% 29% 0.204 0.9630.93 1.9 1 1020100%1
5OPX_ADP_A_600 51% 31% 0.196 0.9530.82 1.88 1 810100%1
5OPX_ADP_H_600 51% 27% 0.199 0.9560.96 1.93 1 1110100%1
5OPX_ADP_F_600 51% 29% 0.206 0.9610.93 1.86 1 520100%1
5OPX_ADP_C_600 51% 31% 0.209 0.9630.9 1.8 1 610100%1
5OPX_ADP_M_600 49% 28% 0.212 0.9620.95 1.92 1 910100%1
5OPX_ADP_K_600 49% 30% 0.196 0.9450.96 1.81 1 810100%1
5OPX_ADP_D_600 48% 28% 0.202 0.9460.98 1.9 2 810100%1
5OPX_ADP_N_600 47% 30% 0.213 0.9521.03 1.76 - 710100%1
1PCQ_ADP_A_600 88% 24% 0.093 0.9671.16 1.93 2 740100%1
1SVT_ADP_F_600 78% 22% 0.127 0.9711.36 1.89 4 720100%1
4KI8_ADP_A_601 71% 39% 0.159 0.9810.95 1.43 1 400100%1
1PF9_ADP_C_702 70% 16% 0.131 0.9491.25 2.37 3 1020100%1
1SX4_ADP_C_600 65% 9% 0.165 0.9671.4 2.95 5 1410100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1
1PHP_ADP_A_396 100% 24% 0.026 0.9951.29 1.8 3 1110100%1